RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 RAB34Q9BZG1 259 aa25.39■■□□□ 1.65
BRD3-202ENST00000371834 EP400Q96L91 3159 aa25.39■■□□□ 1.65
BRD3-202ENST00000371834 PNMA6FA0A0J9YX94 578 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 TTLL1O95922 423 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 SPA17Q15506 151 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 MAN2A1Q16706 1144 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 TMEM119Q4V9L6 283 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 CCDC155Q8N6L0 562 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 HAS1Q92839 578 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 SECISBP2LQ93073 1101 aaKnown RBP25.38■■□□□ 1.65
BRD3-202ENST00000371834 RIC8AQ9NPQ8 531 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 JADE2Q9NQC1 790 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 ZMYND10O75800 440 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 DDR1Q08345 913 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 LRRC55Q6ZSA7 311 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 DDX25Q9UHL0 483 aaKnown RBP25.38■■□□□ 1.65
BRD3-202ENST00000371834 FOCADQ5VW36 1801 aa25.38■■□□□ 1.65
BRD3-202ENST00000371834 ADRA2BP18089 450 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 GPS2Q13227 327 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 KCTD1Q719H9 257 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 MLXIPQ9HAP2 919 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 USP17L10C9JJH3 530 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 EIF3JO75822 258 aaKnown RBP25.37■■□□□ 1.65
BRD3-202ENST00000371834 HNRNPH3P31942 346 aaKnown RBP25.37■■□□□ 1.65
BRD3-202ENST00000371834 EIF4A3P38919 411 aaKnown RBP25.37■■□□□ 1.65
BRD3-202ENST00000371834 SCNN1DP51172 638 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 RRAGAQ7L523 313 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 CAGE1Q8TC20 777 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 SERPINB13Q9UIV8 391 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 PCDHA13Q9Y5I0 950 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 CAPN6Q9Y6Q1 641 aa25.37■■□□□ 1.65
BRD3-202ENST00000371834 LRRC53A6NM62 1247 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 TUBBP07437 444 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 EHHADHQ08426 723 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 DRC1Q96MC2 740 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 IFIH1Q9BYX4 1025 aaKnown RBP25.36■■□□□ 1.65
BRD3-202ENST00000371834 FAN1Q9Y2M0 1017 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 MPHOSPH10O00566 681 aaKnown RBP25.36■■□□□ 1.65
BRD3-202ENST00000371834 HOXA10P31260 410 aaPredicted RBP25.36■■□□□ 1.65
BRD3-202ENST00000371834 SHMT1P34896 483 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 CLK2P49760 499 aaKnown RBP25.36■■□□□ 1.65
BRD3-202ENST00000371834 KIF11P52732 1056 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 TXLNBQ8N3L3 684 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 USP40Q9NVE5 1235 aa25.36■■□□□ 1.65
BRD3-202ENST00000371834 LMAN1P49257 510 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 LRRC63Q05C16 580 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 PPP4R3AQ6IN85 833 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 FGFBP2Q9BYJ0 223 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 SSBP05455 408 aaKnown RBP eCLIP25.35■■□□□ 1.65
BRD3-202ENST00000371834 CKAP4Q07065 602 aaKnown RBP25.35■■□□□ 1.65
BRD3-202ENST00000371834 CCDC102AQ96A19 550 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 EXOC4Q96A65 974 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 DNAJC19Q96DA6 116 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 TBC1D7Q9P0N9 293 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 CALCOCO1Q9P1Z2 691 aa25.35■■□□□ 1.65
BRD3-202ENST00000371834 ANO9A1A5B4 782 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 MARCH6O60337 910 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 PHACTR2O75167 634 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 MOCS3O95396 460 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 C2orf54Q08AI8 447 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 COASYQ13057 564 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 MSL3Q8N5Y2 521 aaKnown RBP25.34■■□□□ 1.65
BRD3-202ENST00000371834 CUL5Q93034 780 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 DEF6Q9H4E7 631 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 BAP1Q92560 729 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 GDAP1L1Q96MZ0 367 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 TSGA10Q9BZW7 698 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 TANGO6Q9C0B7 1094 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 SH2D4AQ9H788 454 aa25.34■■□□□ 1.65
BRD3-202ENST00000371834 FGFR1OPO95684 399 aaKnown RBP25.33■■□□□ 1.65
BRD3-202ENST00000371834 GSPT2Q8IYD1 628 aaKnown RBP25.33■■□□□ 1.65
BRD3-202ENST00000371834 CRAMP1Q96RY5 1269 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 HINFPQ9BQA5 517 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 PPEF1O14829 653 aaPredicted RBP25.33■■□□□ 1.65
BRD3-202ENST00000371834 DOK7Q18PE1 504 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 PPP1R18Q6NYC8 613 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 CCDC84Q86UT8 332 aaPredicted RBP25.33■■□□□ 1.65
BRD3-202ENST00000371834 MYOCDQ8IZQ8 938 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 IQCDQ96DY2 449 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 PSTPIP2Q9H939 334 aa25.33■■□□□ 1.65
BRD3-202ENST00000371834 AKR1B10O60218 316 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USO1O60763 962 aaKnown RBP25.32■■□□□ 1.64
BRD3-202ENST00000371834 CACNB1Q02641 598 aaPredicted RBP25.32■■□□□ 1.64
BRD3-202ENST00000371834 TSG101Q99816 390 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 PCDHA12Q9UN75 941 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 MYH7BA7E2Y1 1941 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 UBR3Q6ZT12 1888 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L15C9J2P7 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L13C9JLJ4 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L11C9JVI0 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L18D6R9N7 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L22D6RA61 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L17D6RBQ6 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L19D6RCP7 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L20D6RJB6 530 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 E9PMD0 336 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 ZBTB5O15062 677 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 RAD21O60216 631 aa25.32■■□□□ 1.64
BRD3-202ENST00000371834 TNNT3P45378 269 aaPredicted RBP25.32■■□□□ 1.64
BRD3-202ENST00000371834 USP17L24Q0WX57 530 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms