RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 DDAH1O94760 285 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 VWA3BQ502W6 1294 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 KLHL7Q8IXQ5 586 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
DKC1-201ENST00000369550 RASGRP4Q8TDF6 673 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 OSBPL7Q9BZF2 842 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 TMBIM4Q9HC24 238 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 DNM1LO00429 736 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 PALMO75781 387 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 ERCC3P19447 782 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 FGFR2P21802 821 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
DKC1-201ENST00000369550 NLRP10Q86W26 655 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 MYH2Q9UKX2 1941 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 COL14A1Q05707 1796 aaKnown RBP18.64■□□□□ 0.57
DKC1-201ENST00000369550 MROH5Q6ZUA9 1318 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 PJA2O43164 708 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 CALML3P27482 149 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 CLNS1AP54105 237 aaKnown RBP18.64■□□□□ 0.57
DKC1-201ENST00000369550 ANKRD20A8PQ5CZ79 823 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 BLIDQ8IZY5 108 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 OR2W6PQ8NHA6 318 aa18.64■□□□□ 0.57
DKC1-201ENST00000369550 CCDC194A0A1B0GVG4 234 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 BACH1O14867 736 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 TMOD1P28289 359 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 HSPA9P38646 679 aaKnown RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 BCAMP50895 628 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 HLFQ16534 295 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 SPRED3Q2MJR0 410 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 CACNA2D3Q8IZS8 1091 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 ABCF2Q9UG63 623 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 PACSIN2Q9UNF0 486 aaPredicted RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 SIK3Q9Y2K2 1263 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 MAGEB6P1A0A0J9YX57 407 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 FRMD3A2A2Y4 597 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 RAD51CO43502 376 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 TNNC1P63316 161 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 CDC37Q16543 378 aaPredicted RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
DKC1-201ENST00000369550 TPX2Q9ULW0 747 aaKnown RBP18.63■□□□□ 0.57
DKC1-201ENST00000369550 TRAPPC3O43617 180 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 PLCG1P19174 1290 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 EHHADHQ08426 723 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 PPP2R5AQ15172 486 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 QPCTQ16769 361 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.573e-16■□□□□ 9.7
DKC1-201ENST00000369550 HPS3Q969F9 1004 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 SEC16BQ96JE7 1060 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 TRIM9Q9C026 710 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 TAF1DQ9H5J8 278 aaPredicted RBP18.62■□□□□ 0.57
DKC1-201ENST00000369550 PLCB1Q9NQ66 1216 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 FAM205AQ6ZU69 1335 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 A0A1B0GUA9 196 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 GRID2IPA4D2P6 1211 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 NEBLO76041 1014 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 SLC8A1P32418 973 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 HSD17B3P37058 310 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 SCTRP47872 440 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 MRPL12P52815 198 aaKnown RBP18.62■□□□□ 0.57
DKC1-201ENST00000369550 ADGRA1Q86SQ6 560 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 FAM228AQ86W67 206 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 C3orf20Q8ND61 904 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 TCP11L1Q9NUJ3 509 aa18.62■□□□□ 0.57
DKC1-201ENST00000369550 NMT2O60551 498 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 TANGO6Q9C0B7 1094 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 LUC7LQ9NQ29 371 aaKnown RBP18.61■□□□□ 0.57
DKC1-201ENST00000369550 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 PAX7P23759 505 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 GBP2P32456 591 aaPredicted RBP18.61■□□□□ 0.57
DKC1-201ENST00000369550 PPP1R2P41236 205 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 GKAP1Q5VSY0 366 aaPredicted RBP18.61■□□□□ 0.57
DKC1-201ENST00000369550 CNNM4Q6P4Q7 775 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 LRIG3Q6UXM1 1119 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 RUFY4Q6ZNE9 571 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 CPLX4Q7Z7G2 160 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 LRRC15Q8TF66 581 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 SLC39A2Q9NP94 309 aa18.61■□□□□ 0.57
DKC1-201ENST00000369550 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 PDE8AO60658 829 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 IFFO1Q0D2I5 559 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 LRRC45Q96CN5 670 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 SLC12A6Q9UHW9 1150 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 RPSAP08865 295 aaKnown RBP18.6■□□□□ 0.57
DKC1-201ENST00000369550 CRYMQ14894 314 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 MAN2A1Q16706 1144 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 INF2Q27J81 1249 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 CABP7Q86V35 215 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 UBLCP1Q8WVY7 318 aaPredicted RBP18.6■□□□□ 0.57
DKC1-201ENST00000369550 SEMA6BQ9H3T3 888 aa18.6■□□□□ 0.57
DKC1-201ENST00000369550 NLRC4Q9NPP4 1024 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms