RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PCDHA7Q9UN72 937 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 FRMPD4Q14CM0 1322 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 DNAJC25-GNG10A0A024R161 153 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 GOLGA6L4A6NEF3 574 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 GADD45BO75293 160 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 MRPS9P82933 396 aaKnown RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 CEP55Q53EZ4 464 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 MOXD1Q6UVY6 613 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
BRCC3-204ENST00000369462 ADD3Q9UEY8 706 aaKnown RBP12.42□□□□□ -0.42
BRCC3-204ENST00000369462 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
BRCC3-204ENST00000369462 PPP6R2O75170 966 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 PTPREP23469 700 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 ORC2Q13416 577 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-204ENST00000369462 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 CLIC6Q96NY7 704 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 ITGB5P18084 799 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 ALDH5A1P51649 535 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-204ENST00000369462 CALCRLQ16602 461 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 KRI1Q8N9T8 703 aaKnown RBP12.41□□□□□ -0.42
BRCC3-204ENST00000369462 LENG9Q96B70 501 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 MBOAT7Q96N66 472 aa12.41□□□□□ -0.42
BRCC3-204ENST00000369462 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 LAD1O00515 517 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 MARCH6O60337 910 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 COBLO75128 1261 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 OR52Z1P0C646 297 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 CCND2P30279 289 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 GRIN1Q05586 938 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 GRB14Q14449 540 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 GJA10Q969M2 543 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
BRCC3-204ENST00000369462 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
BRCC3-204ENST00000369462 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 MEIS1O00470 390 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 Q4G0T1 1027 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 AXDND1Q5T1B0 1012 aaPredicted RBP12.4□□□□□ -0.42
BRCC3-204ENST00000369462 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
BRCC3-204ENST00000369462 FGD4Q96M96 766 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 MTMR9Q96QG7 549 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
BRCC3-204ENST00000369462 SLC15A5A6NIM6 579 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
BRCC3-204ENST00000369462 TXKP42681 527 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 UBE2HP62256 183 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 STXBP2Q15833 593 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 DTHD1Q6ZMT9 781 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 HAS1Q92839 578 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 FERMT2Q96AC1 680 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 WDR11Q9BZH6 1224 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 DOCK3Q8IZD9 2030 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 IL17AQ16552 155 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 CFHR5Q9BXR6 569 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 UBIAD1Q9Y5Z9 338 aa12.39□□□□□ -0.43
BRCC3-204ENST00000369462 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
BRCC3-204ENST00000369462 ZNFX1Q9P2E3 1918 aaKnown RBP12.39□□□□□ -0.43
BRCC3-204ENST00000369462 MSH4O15457 936 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 CUTAO60888 179 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 ARP10275 920 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 CTGFP29279 349 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 PRPHP41219 470 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 PSMC4P43686 418 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 SP3Q02447 781 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 PDE4DQ08499 809 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 ZNF792Q3KQV3 632 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 CSRNP2Q9H175 543 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 KCNH7Q9NS40 1196 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 LCTP09848 1927 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 B4DLN1 442 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 EDNRBP24530 442 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 TECP42680 631 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 MTMR1Q13613 665 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 MORN1Q5T089 497 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 EEPD1Q7L9B9 569 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 MPHOSPH6Q99547 160 aaKnown RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 CENPFP49454 3210 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 EIF3JO75822 258 aaKnown RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 RGS20O76081 388 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 SETQ01105 290 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
BRCC3-204ENST00000369462 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
BRCC3-204ENST00000369462 PLXNB2O15031 1838 aa12.37□□□□□ -0.43
BRCC3-204ENST00000369462 TBX3O15119 743 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms