RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CCDC184Q52MB2 194 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 INO80DQ53TQ3 878 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 ELMSAN1Q6PJG2 1045 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 CHSY3Q70JA7 882 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 HDGFL2Q7Z4V5 671 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 RPAINQ86UA6 219 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 MICALL1Q8N3F8 863 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 TSR2Q969E8 191 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 CCDC74AQ96AQ1 378 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 C12orf49Q9H741 205 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 SIRPGQ9P1W8 387 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 VTI1BQ9UEU0 232 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 DDX41Q9UJV9 622 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 NAV2Q8IVL1 2488 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 RGPD2P0DJD1 1756 aa4.21□□□□□ -1.74
ECHDC1-205ENST00000368295 NRXN2Q9P2S2 1712 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ANKRD26Q9UPS8 1709 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 SHISA8B8ZZ34 492 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 HMMRO75330 724 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 MYL3P08590 195 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 HMGB2P26583 209 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 TERF1P54274 439 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 SNRPNP63162 240 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 DAB2P98082 770 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 NEXNQ0ZGT2 675 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 MTA1Q13330 715 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 C1orf229Q6ZS94 237 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 HFE2Q6ZVN8 426 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ANKRD23Q86SG2 305 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.2□□□□□ -1.745e-7■■■□□ 18.9
ECHDC1-205ENST00000368295 DIS3LQ8TF46 1054 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 RSPH1Q8WYR4 309 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 TTC9Q92623 222 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 APPBP2Q92624 585 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 BTBD6Q96KE9 485 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 AS3MTQ9HBK9 375 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 TMOD3Q9NYL9 352 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 FBXO2Q9UK22 296 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 J3QW42 95 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 GADD45BO75293 160 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 RNASEH2AO75792 299 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 SMNDC1O75940 238 aaKnown RBP eCLIP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ATICP31939 592 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 CHMP4BP1P59074 171 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 MORC3Q14149 939 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ALFQ53S48 1182 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 PERM1Q5SV97 790 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ACBD5Q5T8D3 534 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 PRR5LQ6MZQ0 368 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 PSAPL1Q6NUJ1 521 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 LRP10Q7Z4F1 713 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 MYRIPQ8NFW9 859 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 PLD4Q96BZ4 506 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ARHGAP39Q9C0H5 1083 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 NPHS2Q9NP85 383 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 NAGPAQ9UK23 515 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ACAD8Q9UKU7 415 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ODF2LQ9ULJ1 636 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 ZNF292O60281 2723 aa4.2□□□□□ -1.74
ECHDC1-205ENST00000368295 XIRP2A4UGR9 3374 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 ALPK3Q96L96 1907 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SMG6Q86US8 1419 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PCDH11XQ9BZA7 1347 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PCDH11YQ9BZA8 1340 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 MAP1BP46821 2468 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 RGS9O75916 674 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 ALBP02768 609 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 APPP05067 770 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SRGNP10124 158 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 KCNQ1P51787 676 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 TFF2Q03403 129 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PSMD2Q13200 908 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 CCDC85BQ15834 202 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 GRAMD1BQ3KR37 738 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 ALDH1L2Q3SY69 923 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 KIAA0319Q5VV43 1072 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PRAMEF18Q5VWM3 479 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 KIAA0907Q7Z7F0 614 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 NME9Q86XW9 330 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 EGFL6Q8IUX8 553 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SMAP1Q8IYB5 467 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 ERP27Q96DN0 273 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 CDCA5Q96FF9 252 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 ERO1AQ96HE7 468 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SRPK1Q96SB4 655 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 OSMRQ99650 979 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 LPIN3Q9BQK8 851 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PBX4Q9BYU1 374 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SMG9Q9H0W8 520 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 SUV39H2Q9H5I1 410 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 MRPS23Q9Y3D9 190 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 STARD13Q9Y3M8 1113 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 RABGAP1Q9Y3P9 1069 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
ECHDC1-205ENST00000368295 A0A1W2PP55 124 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 FAM177BA6PVY3 158 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 IGF2BP3O00425 579 aaKnown RBP eCLIP4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 GIPC1O14908 333 aa4.18□□□□□ -1.74
ECHDC1-205ENST00000368295 ITGB8P26012 769 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms