RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RWDD4Q6NW29 188 aaKnown RBP22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 KCNG1Q9UIX4 513 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 EBAG9O00559 213 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 ADCK5Q3MIX3 580 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 SPDYE1Q8NFV5 336 aaPredicted RBP22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 ZNF274Q96GC6 653 aaPredicted RBP22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 PIGOQ8TEQ8 1089 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 CEP128Q6ZU80 1094 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 ATP2A3Q93084 1043 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 CCDC17Q96LX7 622 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 ANGPTL3Q9Y5C1 460 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 PTPRTO14522 1441 aa22.13■■□□□ 1.13
CDC42BPB-201ENST00000361246 XPOTO43592 962 aaKnown RBP22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 NSFP46459 744 aaKnown RBP22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 RASSF7Q02833 373 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 EXOC3L4Q17RC7 722 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 FAM26FQ5R3K3 315 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 ABCB11O95342 1321 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 SSTR3P32745 418 aaPredicted RBP22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 AFAP1L1Q8TED9 768 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 EFCC1Q9HA90 598 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 ACTN1P12814 892 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 ADD2P35612 726 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 PSMD2Q13200 908 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 CCDC62Q6P9F0 684 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 PNMA3Q9UL41 463 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 MYBP10242 640 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 ZNF394Q53GI3 561 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 PRAMEF18Q5VWM3 479 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 PIDD1Q9HB75 910 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 MCUR1Q96AQ8 359 aa22.12■■□□□ 1.13
CDC42BPB-201ENST00000361246 SCN4BQ8IWT1 228 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 PIH1D3Q9NQM4 214 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 PSAPP07602 524 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 TMTC1Q8IUR5 882 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 HSPH1Q92598 858 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 LRRC4Q9HBW1 653 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 TCOF1Q13428 1488 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 STK38LQ9Y2H1 464 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 NR2F2P24468 414 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 ELF2Q15723 593 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 OR6B2Q6IFH4 312 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 CNOT6LQ96LI5 555 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 PTK2Q05397 1052 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 GPATCH4Q5T3I0 446 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 TEX2Q8IWB9 1127 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 RPF1Q9H9Y2 349 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 UBE2TQ9NPD8 197 aaPredicted RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 RBBP5Q15291 538 aaKnown RBP22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 RNF139Q8WU17 664 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 HAUS1Q96CS2 278 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 NACC1Q96RE7 527 aa22.11■■□□□ 1.13
CDC42BPB-201ENST00000361246 NR5A1Q13285 461 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 POC1B-GALNT4F8VUJ3 575 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 S100BP04271 92 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 GOLGA5Q8TBA6 731 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 ACCSQ96QU6 501 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 SHANK2Q9UPX8 1470 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 PDZD4Q76G19 769 aaPredicted RBP22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 OR6B3Q8NGW1 331 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 SSH3Q8TE77 659 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 DDX41Q9UJV9 622 aaKnown RBP22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 H0YCG3 227 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 THNSL1Q8IYQ7 743 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 RAET1EQ8TD07 263 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 SLC27A3Q5K4L6 730 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 CATSPER4Q7RTX7 472 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 ELP3Q9H9T3 547 aa22.1■■□□□ 1.13
CDC42BPB-201ENST00000361246 FAM117BQ6P1L5 589 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 PDCD6IPQ8WUM4 868 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 ATP6V1E2Q96A05 226 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 EPHB1P54762 984 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 LARP4BQ92615 738 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 NT5C1BQ96P26 610 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 MMP19Q99542 508 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 RIC8AQ9NPQ8 531 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 SLC12A6Q9UHW9 1150 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 MFAP3P55082 362 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 PEX3P56589 373 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 ATP11AP98196 1134 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 SNRNP48Q6IEG0 339 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 FANCLQ9NW38 375 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 ANO4Q32M45 955 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 NMT2O60551 498 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 N4BP1O75113 896 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 YWHAGP61981 247 aaKnown RBP eCLIP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 TWF2Q6IBS0 349 aaKnown RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 CCDC84Q86UT8 332 aaPredicted RBP22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 PKNOX2Q96KN3 472 aa22.09■■□□□ 1.13
CDC42BPB-201ENST00000361246 UPP2O95045 317 aa22.08■■□□□ 1.13
CDC42BPB-201ENST00000361246 VSIG1Q86XK7 387 aa22.08■■□□□ 1.13
CDC42BPB-201ENST00000361246 SIX6OS1Q8N1H7 587 aa22.08■■□□□ 1.13
CDC42BPB-201ENST00000361246 DNAAF3Q8N9W5 541 aa22.08■■□□□ 1.12
CDC42BPB-201ENST00000361246 NUF2Q9BZD4 464 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms