RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SREBF1P36956 1147 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 IRF2BP1Q8IU81 584 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 CHURC1Q8WUH1 139 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 PPP2R2CQ9Y2T4 447 aa20.45■□□□□ 0.86
PDLIM7-203ENST00000359895 A0A1W2PQC6 194 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 PMS1P54277 932 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 CXCL9Q07325 125 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 STK4Q13043 487 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 USH1GQ495M9 461 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 CIAPIN1Q6FI81 312 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 REXO1L1PQ8IX06 675 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 CSGALNACT2Q8N6G5 542 aa20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 DUSP9Q99956 384 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-203ENST00000359895 LGALS16A8MUM7 142 aa20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 ECE1P42892 770 aa20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 DALRD3Q5D0E6 543 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 FAM160B2Q86V87 743 aa20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 JDP2Q8WYK2 163 aa20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 NUDT12Q9BQG2 462 aa20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 BMP2KQ9NSY1 1161 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-203ENST00000359895 PHLPP2Q6ZVD8 1323 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 GYPCP04921 128 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 FCER1AP12319 257 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 FECHP22830 423 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CIITAP33076 1130 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 SNAP25P60880 206 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 ETF1P62495 437 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 UBXN1Q04323 297 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 TNIP1Q15025 636 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 HAUS3Q68CZ6 603 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 FOXR2Q6PJQ5 311 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CREBRFQ8IUR6 639 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 GUF1Q8N442 669 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 FAM20AQ96MK3 541 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 FGFR1OPO95684 399 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CYP3A4P08684 503 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CASP14P31944 242 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CAP2P40123 477 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 DNM2P50570 870 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 ANKRD40Q6AI12 368 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 CENPPQ6IPU0 288 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 ERMNQ8TAM6 284 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 DDX12PQ92771 950 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 TMEM39BQ9GZU3 492 aa20.42■□□□□ 0.86
PDLIM7-203ENST00000359895 RRP9O43818 475 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 FAM83BQ5T0W9 1011 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 SYT10Q6XYQ8 523 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 DYMQ7RTS9 669 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 KCNK18Q7Z418 384 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 ETNPPLQ8TBG4 499 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 CPLX3Q8WVH0 158 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 SLC39A2Q9NP94 309 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
PDLIM7-203ENST00000359895 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 ASNSP08243 561 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 CCDC175P0C221 793 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 EHHADHQ08426 723 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 PRR16Q569H4 304 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 TMTC1Q8IUR5 882 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 ZNF507Q8TCN5 953 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 TUBGCP2Q9BSJ2 902 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 EHMT1Q9H9B1 1298 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 MYOZ2Q9NPC6 264 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 FEM1BQ9UK73 627 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 SMCHD1A6NHR9 2005 aa20.4■□□□□ 0.86
PDLIM7-203ENST00000359895 WNT10BO00744 389 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 OPLAHO14841 1288 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 IDEP14735 1019 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 RPS12P25398 132 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 LRRC63Q05C16 580 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 ECM1Q16610 540 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 CNOT6LQ96LI5 555 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 P2RX7Q99572 595 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 GINM1Q9NU53 330 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 MRPL11Q9Y3B7 192 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 ABCB11O95342 1321 aa20.39■□□□□ 0.85
PDLIM7-203ENST00000359895 FXR1P51114 621 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 TNFAIP1Q13829 316 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 KIAA1755Q5JYT7 1200 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 TRIM65Q6PJ69 517 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 TOGARAM2Q6ZUX3 1019 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 CCDC65Q8IXS2 484 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 KCTD17Q8N5Z5 321 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 NLGN2Q8NFZ4 835 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 DNAJC19Q96DA6 116 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 TSG101Q99816 390 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 NUP58Q9BVL2 599 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 PLA2G4BP0C869 781 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 PRKCSHP14314 528 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms