RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PDIA5Q14554 519 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 LONRF3Q496Y0 759 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 NCAPG2Q86XI2 1143 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 ETNPPLQ8TBG4 499 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 PXMP2Q9NR77 195 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 PCDHA12Q9UN75 941 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 TLL2Q9Y6L7 1015 aa17.62■□□□□ 0.41
CTSA-202ENST00000354880 PFASO15067 1338 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 A0A087X0B3 334 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 TOMM70O94826 608 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 EIF2AK2P19525 551 aaKnown RBP17.61■□□□□ 0.41
CTSA-202ENST00000354880 Q3C1V9 767 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 PCNX4Q63HM2 1172 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 KRBA2Q6ZNG9 492 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 ANKRD35Q8N283 1001 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 FAM20AQ96MK3 541 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 PTPN18Q99952 460 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
CTSA-202ENST00000354880 CCSER1Q9C0I3 900 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
CTSA-202ENST00000354880 PP2D1A8MPX8 630 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 MSH4O15457 936 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 ERCC3P19447 782 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 ERVK-24P63145 666 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 SETQ01105 290 aaPredicted RBP17.61■□□□□ 0.41
CTSA-202ENST00000354880 PGM5Q15124 567 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 IL31RAQ8NI17 732 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 GJA10Q969M2 543 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
CTSA-202ENST00000354880 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 LRWD1Q9UFC0 647 aa17.61■□□□□ 0.41
CTSA-202ENST00000354880 MANSC4A6NHS7 340 aaPredicted RBP17.6■□□□□ 0.41
CTSA-202ENST00000354880 MEIS1O00470 390 aa17.6■□□□□ 0.41
CTSA-202ENST00000354880 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
CTSA-202ENST00000354880 NSUN6Q8TEA1 469 aaKnown RBP17.6■□□□□ 0.41
CTSA-202ENST00000354880 DHX58Q96C10 678 aa17.6■□□□□ 0.41
CTSA-202ENST00000354880 MXRA8Q9BRK3 442 aa17.6■□□□□ 0.41
CTSA-202ENST00000354880 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
CTSA-202ENST00000354880 POTEMA6NI47 508 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 ACTN4O43707 911 aaKnown RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 SLC10A3P09131 477 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 MRPS9P82933 396 aaKnown RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 CABP7Q86V35 215 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 ELOA2Q8IYF1 753 aaPredicted RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 IQUBQ8NA54 791 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 UIMC1Q96RL1 719 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 PARK7Q99497 189 aaKnown RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 DISC1Q9NRI5 854 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 USP25Q9UHP3 1055 aa17.59■□□□□ 0.41
CTSA-202ENST00000354880 ABT1Q9ULW3 272 aaKnown RBP17.59■□□□□ 0.41
CTSA-202ENST00000354880 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 KARSQ15046 597 aaKnown RBP17.58■□□□□ 0.41
CTSA-202ENST00000354880 KANK3Q6NY19 840 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 XRRA1Q6P2D8 792 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.41
CTSA-202ENST00000354880 NIPA1Q7RTP0 329 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 GAS2L3Q86XJ1 694 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 GPRC5AQ8NFJ5 357 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 RASSF8Q8NHQ8 419 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.41
CTSA-202ENST00000354880 CCDC39Q9UFE4 941 aa17.58■□□□□ 0.41
CTSA-202ENST00000354880 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.41
CTSA-202ENST00000354880 SLFN14P0C7P3 912 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 BCRP11274 1271 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 MYCLP12524 364 aaPredicted RBP17.58■□□□□ 0.4
CTSA-202ENST00000354880 ITGB5P18084 799 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 E2F4Q16254 413 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 CEP57L1Q8IYX8 460 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 DNERQ8NFT8 737 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 CCDC34Q96HJ3 373 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 MMTAG2Q9BU76 263 aaKnown RBP17.58■□□□□ 0.4
CTSA-202ENST00000354880 MROH8Q9H579 483 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 UBIAD1Q9Y5Z9 338 aa17.58■□□□□ 0.4
CTSA-202ENST00000354880 LCTP09848 1927 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 NR3C2P08235 984 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 CCND2P30279 289 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 CCNA1P78396 465 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 KRT79Q5XKE5 535 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 VSIG10LQ86VR7 867 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 CCDC102AQ96A19 550 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 FUCA2Q9BTY2 467 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
CTSA-202ENST00000354880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
CTSA-202ENST00000354880 ARP10275 920 aa17.56■□□□□ 0.4
CTSA-202ENST00000354880 STAT6P42226 847 aa17.56■□□□□ 0.4
CTSA-202ENST00000354880 SPIRE1Q08AE8 756 aa17.56■□□□□ 0.4
CTSA-202ENST00000354880 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
CTSA-202ENST00000354880 RRAGBQ5VZM2 374 aa17.56■□□□□ 0.4
CTSA-202ENST00000354880 SASS6Q6UVJ0 657 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms