RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SMCHD1A6NHR9 2005 aa19.57■□□□□ 0.72
CLDN4-201ENST00000340958 CYP3A4P08684 503 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 CETPP11597 493 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 MRE11P49959 708 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 GTF2A2P52657 109 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 Q4G0T1 1027 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 REM2Q8IYK8 340 aaPredicted RBP19.56■□□□□ 0.72
CLDN4-201ENST00000340958 USP25Q9UHP3 1055 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
CLDN4-201ENST00000340958 MYH7BA7E2Y1 1941 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 MANSC4A6NHS7 340 aaPredicted RBP19.55■□□□□ 0.72
CLDN4-201ENST00000340958 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 STAT6P42226 847 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 TM4SF4P48230 202 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 FXR2P51116 673 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLDN4-201ENST00000340958 HERVK_113P62684 666 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 SREBF2Q12772 1141 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 KARSQ15046 597 aaKnown RBP19.55■□□□□ 0.72
CLDN4-201ENST00000340958 RRAGBQ5VZM2 374 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 SLC30A10Q6XR72 485 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 LBX2Q6XYB7 198 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 CABP7Q86V35 215 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 RNF214Q8ND24 703 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 SYTL5Q8TDW5 730 aaPredicted RBP19.55■□□□□ 0.72
CLDN4-201ENST00000340958 CRYGNQ8WXF5 182 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 KIAA1468Q9P260 1216 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 PTPRFP10586 1907 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 FAM86B1E9PN63 330 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 FAM86B2P0C5J1 330 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 CIITAP33076 1130 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 BAATQ14032 418 aaPredicted RBP19.55■□□□□ 0.72
CLDN4-201ENST00000340958 ARHGEF16Q5VV41 709 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 HAS1Q92839 578 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 CALML4Q96GE6 196 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 CDK5RAP3Q96JB5 506 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 MS4A4AQ96JQ5 239 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 RNF186Q9NXI6 227 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
CLDN4-201ENST00000340958 A0A087X0B3 334 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 SLFN14P0C7P3 912 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 PNOCQ13519 176 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 PDIA5Q14554 519 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 KRT79Q5XKE5 535 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 GJA10Q969M2 543 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 MBOAT7Q96N66 472 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 CCSER1Q9C0I3 900 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 RBSNQ9H1K0 784 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 COL20A1Q9P218 1284 aa19.54■□□□□ 0.72
CLDN4-201ENST00000340958 CCL15-CCL14A0A0B4J2E2 113 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 TBX3O15119 743 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 ACTN4O43707 911 aaKnown RBP19.53■□□□□ 0.72
CLDN4-201ENST00000340958 TRPA1O75762 1119 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
CLDN4-201ENST00000340958 AFMP43652 599 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 POSTNQ15063 836 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 STX1AQ16623 288 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 CCL15Q16663 113 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 NCAPG2Q86XI2 1143 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 PLA2G4DQ86XP0 818 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 IGSF22Q8N9C0 903 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 CHST13Q8NET6 341 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 RMDN3Q96TC7 470 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 PLIN2Q99541 437 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 FUCA2Q9BTY2 467 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 DISC1Q9NRI5 854 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 POTEMA6NI47 508 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 CA12O43570 354 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 GHRHRQ02643 423 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 CEP55Q53EZ4 464 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 ELOA2Q8IYF1 753 aaPredicted RBP19.53■□□□□ 0.72
CLDN4-201ENST00000340958 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 CYP2W1Q8TAV3 490 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 SMCR8Q8TEV9 937 aaPredicted RBP19.53■□□□□ 0.72
CLDN4-201ENST00000340958 ZFP91Q96JP5 570 aaPredicted RBP19.53■□□□□ 0.72
CLDN4-201ENST00000340958 FAM20AQ96MK3 541 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 SPATC1LQ9H0A9 340 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 KCNMB3Q9NPA1 279 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 BTBD7Q9P203 1132 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 FBXO40Q9UH90 709 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 LOC285556D6RIA3 1793 aa19.53■□□□□ 0.72
CLDN4-201ENST00000340958 IGF2BP3O00425 579 aaKnown RBP eCLIP19.52■□□□□ 0.72
CLDN4-201ENST00000340958 BIN1O00499 593 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
CLDN4-201ENST00000340958 MYCLP12524 364 aaPredicted RBP19.52■□□□□ 0.72
CLDN4-201ENST00000340958 CTCFP49711 727 aaPredicted RBP19.52■□□□□ 0.72
CLDN4-201ENST00000340958 MOGSQ13724 837 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 ANO6Q4KMQ2 910 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 GPAT2Q6NUI2 795 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 IFNL1Q8IU54 200 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 BRI3BPQ8WY22 251 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 PTPN18Q99952 460 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 ANO10Q9NW15 660 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 RLFQ13129 1914 aa19.52■□□□□ 0.72
CLDN4-201ENST00000340958 COL11A1P12107 1806 aaPredicted RBP19.51■□□□□ 0.71
CLDN4-201ENST00000340958 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
CLDN4-201ENST00000340958 MSH4O15457 936 aa19.51■□□□□ 0.71
CLDN4-201ENST00000340958 PEX10O60683 326 aa19.51■□□□□ 0.71
CLDN4-201ENST00000340958 LBX1P52954 281 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms