RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 MAP7D1Q3KQU3 841 aa14.09□□□□□ -0.15
DNMT1-201ENST00000340748 DEPTORQ8TB45 409 aa14.09□□□□□ -0.15
DNMT1-201ENST00000340748 UBE2Q2Q8WVN8 375 aa14.09□□□□□ -0.15
DNMT1-201ENST00000340748 FBXO40Q9UH90 709 aa14.09□□□□□ -0.15
DNMT1-201ENST00000340748 BCORL1Q5H9F3 1711 aa14.09□□□□□ -0.15
DNMT1-201ENST00000340748 FAM196BA6NMK8 535 aa14.08□□□□□ -0.15
DNMT1-201ENST00000340748 MYL1P05976 194 aa14.08□□□□□ -0.15
DNMT1-201ENST00000340748 ZSCAN20P17040 1043 aaPredicted RBP14.08□□□□□ -0.15
DNMT1-201ENST00000340748 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.15
DNMT1-201ENST00000340748 SND1Q7KZF4 910 aaKnown RBP eCLIP14.08□□□□□ -0.15
DNMT1-201ENST00000340748 GABPB2Q8TAK5 448 aaPredicted RBP14.08□□□□□ -0.15
DNMT1-201ENST00000340748 ISCA1Q9BUE6 129 aa14.08□□□□□ -0.15
DNMT1-201ENST00000340748 STIM2Q9P246 746 aa14.08□□□□□ -0.15
DNMT1-201ENST00000340748 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 TRIM31Q9BZY9 425 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 ABCC12Q96J65 1359 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 SNAP23O00161 211 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 CD2BP2O95400 341 aaKnown RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 ZNF827Q17R98 1081 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 LONRF2Q1L5Z9 754 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 FAM26FQ5R3K3 315 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 DYNLL2Q96FJ2 89 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 ERCC3P19447 782 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 FAM102BQ5T8I3 360 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 PI16Q6UXB8 463 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 BCL2L12Q9HB09 334 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 AKT3Q9Y243 479 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 PRPF6O94906 941 aaKnown RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 MMP1P03956 469 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 FCER1AP12319 257 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 TNNI1P19237 187 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 OAS2P29728 719 aaKnown RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 SLC16A2P36021 539 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 CYP2J2P51589 502 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 DHTKD1Q96HY7 919 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-201ENST00000340748 ANTXR1Q9H6X2 564 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
DNMT1-201ENST00000340748 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 TCP1P17987 556 aaKnown RBP14.07□□□□□ -0.16
DNMT1-201ENST00000340748 PRDX5P30044 214 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ELMSAN1Q6PJG2 1045 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ANKRD13AQ8IZ07 590 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 IPO4Q8TEX9 1081 aaKnown RBP14.07□□□□□ -0.16
DNMT1-201ENST00000340748 MYO1AQ9UBC5 1043 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
DNMT1-201ENST00000340748 DAPK3O43293 454 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 EEF1GP26641 437 aaKnown RBP14.07□□□□□ -0.16
DNMT1-201ENST00000340748 FCGRTP55899 365 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 RNF34Q969K3 372 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 PSMB7Q99436 277 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■■□ 19.7
DNMT1-201ENST00000340748 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 IFNAR1P17181 557 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 ITIH3Q06033 890 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 CCDC110Q8TBZ0 833 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 DESI2Q9BSY9 194 aa14.07□□□□□ -0.16
DNMT1-201ENST00000340748 K7ENM7 598 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 PRPF3O43395 683 aaKnown RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 CD19P15391 556 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 GCFC2P16383 781 aaKnown RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 HMGCS2P54868 508 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 LRMPQ12912 555 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 ADAM9Q13443 819 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 AGBL3Q8NEM8 1001 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 RPS6KC1Q96S38 1066 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 SLC39A2Q9NP94 309 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 CIB2O75838 187 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 RASSF4Q9H2L5 321 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 ZNF70Q9UC06 446 aaPredicted RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 LIFRP42702 1097 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 DENND2CQ68D51 928 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 KIAA1841Q6NSI8 718 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 GRK7Q8WTQ7 553 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 PUS7LQ9H0K6 701 aaKnown RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 LARSQ9P2J5 1176 aaKnown RBP14.06□□□□□ -0.16
DNMT1-201ENST00000340748 PPP1R21Q6ZMI0 780 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 CEP57Q86XR8 500 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 ZNF34Q8IZ26 560 aa14.06□□□□□ -0.16
DNMT1-201ENST00000340748 KRT19P08727 400 aa14.05□□□□□ -0.16
DNMT1-201ENST00000340748 YARSP54577 528 aaKnown RBP14.05□□□□□ -0.16
DNMT1-201ENST00000340748 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms