RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 SP2Q02086 613 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 PGM5Q15124 567 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 NBPF20Q3BBV1 942 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 AFG1LQ8WV93 481 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 KAT2BQ92831 832 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 GPKOWQ92917 476 aaPredicted RBP eCLIP19.77■□□□□ 0.76
BRCC3-202ENST00000340647 FAM161BQ96MY7 647 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 CTAGE1Q96RT6 745 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 MTG1Q9BT17 334 aaPredicted RBP19.77■□□□□ 0.76
BRCC3-202ENST00000340647 BCAS3Q9H6U6 928 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 POLR3EQ9NVU0 708 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 MAP3K20Q9NYL2 800 aaKnown RBP19.77■□□□□ 0.76
BRCC3-202ENST00000340647 TANC1Q9C0D5 1861 aa19.77■□□□□ 0.76
BRCC3-202ENST00000340647 FRMPD4Q14CM0 1322 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 CHD9Q3L8U1 2897 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 EIF3JO75822 258 aaKnown RBP19.76■□□□□ 0.75
BRCC3-202ENST00000340647 ACRP10323 421 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 SMARCA1P28370 1054 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 CASC1Q6TDU7 716 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 SGMS1Q86VZ5 419 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 SAMD3Q8N6K7 520 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 TCEANC2Q96MN5 208 aa19.76■□□□□ 0.75
BRCC3-202ENST00000340647 MPHOSPH6Q99547 160 aaKnown RBP19.76■□□□□ 0.75
BRCC3-202ENST00000340647 B4DLN1 442 aa19.75■□□□□ 0.75
BRCC3-202ENST00000340647 TLR3O15455 904 aaKnown RBP19.75■□□□□ 0.75
BRCC3-202ENST00000340647 CDC45O75419 566 aa19.75■□□□□ 0.75
BRCC3-202ENST00000340647 MMP3P08254 477 aa19.75■□□□□ 0.75
BRCC3-202ENST00000340647 MRPL12P52815 198 aaKnown RBP19.75■□□□□ 0.75
BRCC3-202ENST00000340647 MRPS9P82933 396 aaKnown RBP19.75■□□□□ 0.75
BRCC3-202ENST00000340647 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.75■□□□□ 0.75
BRCC3-202ENST00000340647 KCNB2Q92953 911 aa19.75■□□□□ 0.75
BRCC3-202ENST00000340647 TTYH1Q9H313 450 aaPredicted RBP19.75■□□□□ 0.75
BRCC3-202ENST00000340647 GCOM1H8Y6P7 765 aaPredicted RBP19.74■□□□□ 0.75
BRCC3-202ENST00000340647 MEIS2O14770 477 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 GH1P01241 217 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 POLR2MP0CAP2 368 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 CYP2C9P11712 490 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 SMAD3P84022 425 aaKnown RBP19.74■□□□□ 0.75
BRCC3-202ENST00000340647 EMID1Q96A84 441 aaPredicted RBP19.74■□□□□ 0.75
BRCC3-202ENST00000340647 RNPC3Q96LT9 517 aaKnown RBP19.74■□□□□ 0.75
BRCC3-202ENST00000340647 SEZ6LQ9BYH1 1024 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 HIPK3Q9H422 1215 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 PTPRSQ13332 1948 aa19.74■□□□□ 0.75
BRCC3-202ENST00000340647 hCG_1642624A0A1W2PR95 340 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 MYCLP12524 364 aaPredicted RBP19.73■□□□□ 0.75
BRCC3-202ENST00000340647 HOXD8P13378 290 aaPredicted RBP19.73■□□□□ 0.75
BRCC3-202ENST00000340647 CCL23P55773 120 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 FUT2Q10981 343 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 SEMA3FQ13275 785 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 ZNF365Q70YC5 407 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 FCHSD1Q86WN1 690 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 TMTC2Q8N394 836 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
BRCC3-202ENST00000340647 CCDC136Q96JN2 1154 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
BRCC3-202ENST00000340647 PPIGQ13427 754 aaKnown RBP eCLIP19.72■□□□□ 0.75
BRCC3-202ENST00000340647 MYSM1Q5VVJ2 828 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 NFRKBQ6P4R8 1299 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 TMTC3Q6ZXV5 915 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 FANCBQ8NB91 859 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 IL23AQ9NPF7 189 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 FAM217BQ9NTX9 383 aaPredicted RBP19.72■□□□□ 0.75
BRCC3-202ENST00000340647 CXXC1Q9P0U4 656 aaPredicted RBP19.72■□□□□ 0.75
BRCC3-202ENST00000340647 TELO2Q9Y4R8 837 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 CHD7Q9P2D1 2997 aa19.72■□□□□ 0.75
BRCC3-202ENST00000340647 CCDC69A6NI79 296 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 GRXCR1A8MXD5 290 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 KPNA6O60684 536 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 CPA1P15085 419 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 KIF5BP33176 963 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 HIC1Q14526 733 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 APOA5Q6Q788 366 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 NFXL1Q6ZNB6 911 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 TMEM199Q8N511 208 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 SCLYQ96I15 445 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 LZTS2Q9BRK4 669 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 SEMA6BQ9H3T3 888 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 MRVI1Q9Y6F6 885 aa19.71■□□□□ 0.75
BRCC3-202ENST00000340647 HAS3O00219 553 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 PIK3CDO00329 1044 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 SORBS3O60504 671 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 UBA1P22314 1058 aaKnown RBP19.7■□□□□ 0.74
BRCC3-202ENST00000340647 GPNMBQ14956 572 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 CELF3Q5SZQ8 465 aaKnown RBP19.7■□□□□ 0.74
BRCC3-202ENST00000340647 TYW1BQ6NUM6 668 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 DHX32Q7L7V1 743 aaKnown RBP19.7■□□□□ 0.74
BRCC3-202ENST00000340647 CCDC82Q8N4S0 544 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 RRP36Q96EU6 259 aaKnown RBP19.7■□□□□ 0.74
BRCC3-202ENST00000340647 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
BRCC3-202ENST00000340647 SLC12A7Q9Y666 1083 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 CNTNAP5Q8WYK1 1306 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 MYO9BQ13459 2157 aa19.7■□□□□ 0.74
BRCC3-202ENST00000340647 PBX2P40425 430 aa19.69■□□□□ 0.74
BRCC3-202ENST00000340647 ZNF697Q5TEC3 545 aa19.69■□□□□ 0.74
BRCC3-202ENST00000340647 GDF6Q6KF10 455 aaPredicted RBP19.69■□□□□ 0.74
BRCC3-202ENST00000340647 SESTD1Q86VW0 696 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 372.4 ms