RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 VPS16Q9H269 839 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 FAM198AQ9UFP1 575 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 PLIN4Q96Q06 1357 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 GNA11P29992 359 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 LETM2Q2VYF4 491 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 MICALL1Q8N3F8 863 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 COA7Q96BR5 231 aa20.88■□□□□ 0.93
PSPC1-201ENST00000338910 BIN2Q9UBW5 565 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-201ENST00000338910 DDTLA6NHG4 134 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 COBLO75128 1261 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 SPAG1Q07617 926 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 FAM76AQ8TAV0 307 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 MTRQ99707 1265 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 CRACR2AQ9BSW2 395 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 ZNF277Q9NRM2 450 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 SRGAP2O75044 1071 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 ZBTB7AO95365 584 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 MYBL2P10244 700 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 BRD2P25440 801 aaKnown RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 MCTP2Q6DN12 878 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 RTKN2Q8IZC4 609 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 GDAP1L1Q96MZ0 367 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 MYCBPQ99417 103 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 SELENOOQ9BVL4 669 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 TDRD3Q9H7E2 651 aaKnown RBP20.87■□□□□ 0.93
PSPC1-201ENST00000338910 DNAJC18Q9H819 358 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 TAB2Q9NYJ8 693 aa20.87■□□□□ 0.93
PSPC1-201ENST00000338910 CCNT1O60563 726 aaKnown RBP20.86■□□□□ 0.93
PSPC1-201ENST00000338910 IRAK1P51617 712 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 NONOQ15233 471 aaKnown RBP eCLIP20.86■□□□□ 0.93
PSPC1-201ENST00000338910 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 TTBK2Q6IQ55 1244 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 IDI2Q9BXS1 227 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 SKIDA1Q1XH10 827 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 TCP11X2Q5H9J9 407 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 CCNI2Q6ZMN8 369 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-201ENST00000338910 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-201ENST00000338910 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 KRT25Q7Z3Z0 450 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 KAT2BQ92831 832 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 PLIN2Q99541 437 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 TMEM260Q9NX78 707 aa20.86■□□□□ 0.93
PSPC1-201ENST00000338910 RAD21O60216 631 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 ZMYND10O75800 440 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 RAD17O75943 681 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 SNHG28P0DPA3 235 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 CCT5P48643 541 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 CKAP4Q07065 602 aaKnown RBP20.85■□□□□ 0.93
PSPC1-201ENST00000338910 SHROOM1Q2M3G4 852 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-201ENST00000338910 LARGE2Q8N3Y3 721 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 PRMT6Q96LA8 375 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-201ENST00000338910 RWDD2AQ9UIY3 292 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 ERLIN2O94905 339 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 SLC16A2P36021 539 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 HERVK_113P62684 666 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 GSPT2Q8IYD1 628 aaKnown RBP20.85■□□□□ 0.93
PSPC1-201ENST00000338910 CEP89Q96ST8 783 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 EHD4Q9H223 541 aa20.85■□□□□ 0.93
PSPC1-201ENST00000338910 DHX36Q9H2U1 1008 aaKnown RBP20.85■□□□□ 0.93
PSPC1-201ENST00000338910 GOLGA6CA6NDK9 693 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 GOLGA6DP0CG33 693 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 STAT6P42226 847 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 ZNF543Q08ER8 600 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 KCTD1Q719H9 257 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 REXO1Q8N1G1 1221 aaKnown RBP20.84■□□□□ 0.93
PSPC1-201ENST00000338910 TBCKQ8TEA7 893 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 PSMD1Q99460 953 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 PYM1Q9BRP8 204 aaKnown RBP20.84■□□□□ 0.93
PSPC1-201ENST00000338910 GOLGA6AQ9NYA3 693 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 FAM169AQ9Y6X4 670 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 MYO3BQ8WXR4 1341 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 KCNJ18B7U540 433 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 UBA7P41226 1012 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 KCNJ12Q14500 433 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 ZNF662Q6ZS27 426 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 ADGRF4Q8IZF3 695 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 OR8K1Q8NGG5 319 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 CAPZA3Q96KX2 299 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 PI4KBQ9UBF8 816 aa20.84■□□□□ 0.93
PSPC1-201ENST00000338910 LOC102724159A0A0B4J2E5 919 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 TTC26A0AVF1 554 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 EBAG9O00559 213 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 PPFIA1Q13136 1202 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 PWP2Q15269 919 aaKnown RBP20.83■□□□□ 0.93
PSPC1-201ENST00000338910 CCDC96Q2M329 555 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 GRIPAP1Q4V328 841 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 CCDC122Q5T0U0 273 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 NEK8Q86SG6 692 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 ANKRD20A12PQ8NF67 263 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 JAKMIP2Q96AA8 810 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 DNAJC7Q99615 494 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.93
PSPC1-201ENST00000338910 ATF5Q9Y2D1 282 aaPredicted RBP20.83■□□□□ 0.93
PSPC1-201ENST00000338910 GOLGA6BA6NDN3 693 aa20.83■□□□□ 0.92
PSPC1-201ENST00000338910 LIG3P49916 1009 aa20.83■□□□□ 0.92
PSPC1-201ENST00000338910 PAK1Q13153 545 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms