RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TCP1P17987 556 aaKnown RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 TXKP42681 527 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 RHBDL3P58872 404 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 C2orf54Q08AI8 447 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 PSMD2Q13200 908 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 NFIXQ14938 502 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 CALCRLQ16602 461 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 TMEM119Q4V9L6 283 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 AFAP1L1Q8TED9 768 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 SMCR8Q8TEV9 937 aaPredicted RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 RAD54LQ92698 747 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 MLXIPQ9HAP2 919 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 TMEM260Q9NX78 707 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 BIN2Q9UBW5 565 aaPredicted RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 RRP15Q9Y3B9 282 aaKnown RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 LRRC53A6NM62 1247 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 RBAK-RBAKDNI3L0D1 243 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 GNPATO15228 680 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 SLC37A4O43826 429 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 SHOX2O60902 331 aaPredicted RBP9.66□□□□□ -0.86
CLK1-201ENST00000321356 PDHBP11177 359 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 PLCG2P16885 1265 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 GGCXP38435 758 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 ZCWPW2Q504Y3 356 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 HGSNATQ68CP4 663 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 PDXDC1Q6P996 788 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 TEX11Q8IYF3 940 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 PROM2Q8N271 834 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 SPATA4Q8NEY3 305 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 ZBTB9Q96C00 473 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 OSBPL9Q96SU4 736 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 CRACR2AQ9BSW2 395 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 RIC8AQ9NPQ8 531 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 HYOU1Q9Y4L1 999 aa9.66□□□□□ -0.86
CLK1-201ENST00000321356 GAKO14976 1311 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 MOCS3O95396 460 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 TDP2O95551 362 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 SNHG28P0DPA3 235 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 IL1R1P14778 569 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 PTF1AQ7RTS3 328 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 KCNK18Q7Z418 384 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 GSPT2Q8IYD1 628 aaKnown RBP9.65□□□□□ -0.86
CLK1-201ENST00000321356 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 SYN2Q92777 582 aaPredicted RBP9.65□□□□□ -0.86
CLK1-201ENST00000321356 DNAJC19Q96DA6 116 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 ALS2CR12Q96Q35 445 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 SH3GL2Q99962 352 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 RAB34Q9BZG1 259 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 MMRN2Q9H8L6 949 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 DMGDHQ9UI17 866 aaKnown RBP9.65□□□□□ -0.86
CLK1-201ENST00000321356 SALL4Q9UJQ4 1053 aa9.65□□□□□ -0.86
CLK1-201ENST00000321356 POTEMA6NI47 508 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 AKR1B10O60218 316 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 PPFIA4O75335 1185 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 MAGEA1P43355 309 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 ADCY7P51828 1080 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 SEPT2Q15019 361 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 EZH2Q15910 746 aaKnown RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 ASPRV1Q53RT3 343 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 PPP4R3AQ6IN85 833 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 RRAGAQ7L523 313 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 DYMQ7RTS9 669 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 RNF10Q8N5U6 811 aaKnown RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 GLIS3Q8NEA6 775 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 SNX29Q8TEQ0 813 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 HDAC7Q8WUI4 952 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 RIN2Q8WYP3 895 aaPredicted RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 DDX12PQ92771 950 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 LRRC1Q9BTT6 524 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 CD209Q9NNX6 404 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
CLK1-201ENST00000321356 LY75O60449 1722 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 ARFGEF1Q9Y6D6 1849 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 MYH7BA7E2Y1 1941 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 IGKV6D-41A0A0C4DH26 115 aa9.64□□□□□ -0.87
CLK1-201ENST00000321356 GOLGA6BA6NDN3 693 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms