RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 RAD54LQ92698 747 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 MLXIPQ9HAP2 919 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 TCP10Q12799 353 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 GPS2Q13227 327 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ENOX2Q16206 610 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 NELFCDQ8IXH7 590 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ZC3H12CQ9C0D7 883 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF3CLB5ME19 914 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF4A3P38919 411 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ZNF543Q08ER8 600 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ERGIC2Q96RQ1 377 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF3CQ99613 913 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 IFIH1Q9BYX4 1025 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 NLRC4Q9NPP4 1024 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 PNMA6FA0A0J9YX94 578 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 FXR2P51116 673 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 CERKQ8TCT0 537 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 CRACR2AQ9BSW2 395 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 PSTPIP2Q9H939 334 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 STK17AQ9UEE5 414 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 MYH1P12882 1939 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 TRAF5O00463 557 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 MATR3P43243 847 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 HNRNPH2P55795 449 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 GSPT2Q8IYD1 628 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 CCDC170Q8IYT3 715 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SECISBP2LQ93073 1101 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 PCDHA12Q9UN75 941 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 NPHP3-ACAD11A0A0J9YXS1 232 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 LRRC53A6NM62 1247 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 PDE2AO00408 941 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SNAP25P60880 206 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 NFIAQ12857 509 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 CACNA2D4Q7Z3S7 1137 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 LRRIQ3A6PVS8 624 aaPredicted RBP19.33■□□□□ 0.69
COL9A1-201ENST00000320755 E9PMD0 336 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 MOCS3O95396 460 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 CXCR5P32302 372 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 GABPAQ06546 454 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 EHBP1Q8NDI1 1231 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 CUL5Q93034 780 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 FAN1Q9Y2M0 1017 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 PPEF1O14829 653 aaPredicted RBP19.33■□□□□ 0.69
COL9A1-201ENST00000320755 MAN2A1Q16706 1144 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 HAS1Q92839 578 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 KIAA1024Q9UPX6 916 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 PVALEFA0A1B0GWK0 134 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 EIF3JO75822 258 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PPP1R2P41236 205 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 DNA2P51530 1060 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 VAV2P52735 878 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 NAP1L1P55209 391 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 C2orf54Q08AI8 447 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 SEMA3FQ13275 785 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 CCDC40Q4G0X9 1142 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PAPD7Q5XG87 772 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 FGFBP2Q9BYJ0 223 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 RIC8AQ9NPQ8 531 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 SIK3Q9Y2K2 1263 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PCDHA13Q9Y5I0 950 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 CAPN6Q9Y6Q1 641 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 ZNF831Q5JPB2 1677 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SHMT1P34896 483 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 KIF11P52732 1056 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 MRPL12P52815 198 aaKnown RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 USP14P54578 494 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TUBB4BP68371 445 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 APBA1Q02410 837 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 ARID5AQ03989 594 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PLAGL2Q9UPG8 496 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PCDHAC2Q9Y5I4 1007 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PDIA5Q14554 519 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TDRD12Q587J7 1177 aaKnown RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 HSP90B2PQ58FF3 399 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TSG101Q99816 390 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PANK4Q9NVE7 773 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SMARCAL1Q9NZC9 954 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 USO1O60763 962 aaKnown RBP19.31■□□□□ 0.68
COL9A1-201ENST00000320755 STAT3P40763 770 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 RBM5P52756 815 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL9A1-201ENST00000320755 MYOCDQ8IZQ8 938 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 MYH10P35580 1976 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 COASYQ13057 564 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 CDC42EP5Q6NZY7 148 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 CDK5RAP2Q96SN8 1893 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 FAM193AP78312 1265 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms