RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 TAAR1Q96RJ0 339 aa9.78□□□□□ -0.84
MSL3-201ENST00000312196 ESYT1Q9BSJ8 1104 aa9.78□□□□□ -0.84
MSL3-201ENST00000312196 UBA5Q9GZZ9 404 aa9.78□□□□□ -0.84
MSL3-201ENST00000312196 COL4A6Q14031 1691 aa9.78□□□□□ -0.84
MSL3-201ENST00000312196 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 TXNP10599 105 aaKnown RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 CSF2RAP15509 400 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 BEX3Q00994 111 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 CXCL17Q6UXB2 119 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 FBXL16Q8N461 479 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 PPTC7Q8NI37 304 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 RMDN3Q96TC7 470 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 PDCD2LQ9BRP1 358 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 ZKSCAN3Q9BRR0 538 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 GPHNQ9NQX3 736 aaPredicted RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 NR3C2P08235 984 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 POLR2MP0CAP2 368 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 GOLGA8HP0CJ92 632 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 CCND2P30279 289 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 MCM5P33992 734 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 ANTXR2P58335 489 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 NOL8Q76FK4 1167 aaKnown RBP9.77□□□□□ -0.85
MSL3-201ENST00000312196 LY9Q9HBG7 655 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 COL20A1Q9P218 1284 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 SLC4A7Q9Y6M7 1214 aa9.77□□□□□ -0.85
MSL3-201ENST00000312196 NID2Q14112 1375 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 SH2B2O14492 632 aaPredicted RBP9.76□□□□□ -0.85
MSL3-201ENST00000312196 MMP3P08254 477 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 HOXC8P31273 242 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 ARHGEF16Q5VV41 709 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 GIMAP8Q8ND71 665 aaPredicted RBP9.76□□□□□ -0.85
MSL3-201ENST00000312196 AFAP1L1Q8TED9 768 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 VTI1AQ96AJ9 217 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 C1QTNF1Q9BXJ1 281 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 B4GALT4O60513 344 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 PPP1R11O60927 126 aaPredicted RBP9.76□□□□□ -0.85
MSL3-201ENST00000312196 PPFIA4O75335 1185 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
MSL3-201ENST00000312196 RPLP2P05387 115 aaKnown RBP9.76□□□□□ -0.85
MSL3-201ENST00000312196 PTK7Q13308 1070 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 KRT32Q14532 448 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 DGKDQ16760 1214 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 SLC35G1Q2M3R5 365 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 TMEM67Q5HYA8 995 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 STAG2Q8N3U4 1231 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 GLT8D2Q9H1C3 349 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 SLC28A3Q9HAS3 691 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 PCDHA1Q9Y5I3 950 aa9.76□□□□□ -0.85
MSL3-201ENST00000312196 SLC27A2O14975 620 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 F2P00734 622 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 CXCL10P02778 98 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 MYL3P08590 195 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 HMGB1P09429 215 aaKnown RBP9.75□□□□□ -0.85
MSL3-201ENST00000312196 PGM5Q15124 567 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 CELF3Q5SZQ8 465 aaKnown RBP9.75□□□□□ -0.85
MSL3-201ENST00000312196 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 VWCEQ96DN2 955 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 RRP36Q96EU6 259 aaKnown RBP9.75□□□□□ -0.85
MSL3-201ENST00000312196 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
MSL3-201ENST00000312196 WNT8AQ9H1J5 351 aa9.75□□□□□ -0.85
MSL3-201ENST00000312196 RBM28Q9NW13 759 aaKnown RBP9.75□□□□□ -0.85
MSL3-201ENST00000312196 SPATA31C2B4DYI2 1134 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 MAFGO15525 162 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 ARIH2O95376 493 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 CYP2C18P33260 490 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 USH1GQ495M9 461 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 ZNF654Q8IZM8 581 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 FAM177A1Q8N128 213 aaPredicted RBP9.74□□□□□ -0.85
MSL3-201ENST00000312196 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
MSL3-201ENST00000312196 INPP4AQ96PE3 977 aaPredicted RBP9.74□□□□□ -0.85
MSL3-201ENST00000312196 NKX2-4Q9H2Z4 354 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 MTMR7Q9Y216 660 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 KIF28PB7ZC32 967 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 CYTH3O43739 400 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 PSEN2P49810 448 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 NEDD9Q14511 834 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 CREB3L3Q68CJ9 461 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 RPAINQ86UA6 219 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 TBC1D5Q92609 795 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 KAT2BQ92831 832 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 CDHR1Q96JP9 859 aa9.74□□□□□ -0.85
MSL3-201ENST00000312196 PRC1O43663 620 aa9.73□□□□□ -0.85
MSL3-201ENST00000312196 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
MSL3-201ENST00000312196 EXOSC10Q01780 885 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms