RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SPA17Q15506 151 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 C15orf52Q6ZUT6 534 aaKnown RBP16.81■□□□□ 0.28
CSDC2-201ENST00000306149 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 RPGRIP1Q96KN7 1286 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 VIPAS39Q9H9C1 493 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
CSDC2-201ENST00000306149 SERPINB2P05120 415 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 EIF4A3P38919 411 aaKnown RBP16.8■□□□□ 0.28
CSDC2-201ENST00000306149 SLC20A2Q08357 652 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 SECISBP2LQ93073 1101 aaKnown RBP16.8■□□□□ 0.28
CSDC2-201ENST00000306149 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 MOCS3O95396 460 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 MYBL2P10244 700 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 VAV2P52735 878 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
CSDC2-201ENST00000306149 KRT79Q5XKE5 535 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 KCTD1Q719H9 257 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 ADGRF4Q8IZF3 695 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 RAD54LQ92698 747 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
CSDC2-201ENST00000306149 DEF6Q9H4E7 631 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 SMARCAL1Q9NZC9 954 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
CSDC2-201ENST00000306149 ESYT2A0FGR8 921 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 LRRC53A6NM62 1247 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 CXCR5P32302 372 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
CSDC2-201ENST00000306149 SCNN1DP51172 638 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 CKAP4Q07065 602 aaKnown RBP16.79■□□□□ 0.28
CSDC2-201ENST00000306149 HSP90B2PQ58FF3 399 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 PCDHA13Q9Y5I0 950 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 TARSL2A2RTX5 802 aaKnown RBP16.79■□□□□ 0.28
CSDC2-201ENST00000306149 MARCH6O60337 910 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 RPS6KA5O75582 802 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 KIF11P52732 1056 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
CSDC2-201ENST00000306149 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 AKR1B10O60218 316 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 SMARCA1P28370 1054 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 COG1Q8WTW3 980 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 NLRC4Q9NPP4 1024 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 TMEM51Q9NW97 253 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 GAKO14976 1311 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 A0A1W2PQJ5 194 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 GYS1P13807 737 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 NOVP48745 357 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 APBA1Q02410 837 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 CRY2Q49AN0 593 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 HAS1Q92839 578 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 RBM17Q96I25 401 aaKnown RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
CSDC2-201ENST00000306149 USP21Q9UK80 565 aa16.78■□□□□ 0.28
CSDC2-201ENST00000306149 ANO9A1A5B4 782 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 FIGNQ5HY92 759 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 LRRC55Q6ZSA7 311 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 DDX25Q9UHL0 483 aaKnown RBP16.77■□□□□ 0.28
CSDC2-201ENST00000306149 SALL4Q9UJQ4 1053 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 NPHP3-ACAD11A0A0J9YXS1 232 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 NCK2O43639 380 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 IVLP07476 585 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 PPP1R2P41236 205 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 GFPT1Q06210 699 aaPredicted RBP16.77■□□□□ 0.28
CSDC2-201ENST00000306149 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 NELFCDQ8IXH7 590 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 CERS5Q8N5B7 392 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
CSDC2-201ENST00000306149 E9PMD0 336 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 CDK17Q00537 523 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 GABPAQ06546 454 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 ZNF543Q08ER8 600 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.27
CSDC2-201ENST00000306149 SLF2Q8IX21 1173 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 RAB34Q9BZG1 259 aa16.77■□□□□ 0.27
CSDC2-201ENST00000306149 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
CSDC2-201ENST00000306149 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms