RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GPR75-ASB3A0A0A6YYF3 556 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 FRMD3A2A2Y4 597 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 AFMP43652 599 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 GNAQP50148 359 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 FXR2P51116 673 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS50-202ENST00000305866 FKBP1AP62942 108 aaKnown RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 ZBED6P86452 979 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 ERFEQ4G0M1 354 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 ANKRD18AQ8IVF6 992 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 PDILTQ8N807 584 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 CASKIN2Q8WXE0 1202 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 PPM1EQ8WY54 764 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 TLCD1Q96CP7 247 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 DHTKD1Q96HY7 919 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 TRIM9Q9C026 710 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 GANQ9H2C0 597 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 TNS1Q9HBL0 1735 aaKnown RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 hCG_1642624A0A1W2PR95 340 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 CYP7A1P22680 504 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 FLT3P36888 993 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 STIM1Q13586 685 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 SPTY2D1Q68D10 685 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 RASGEF1CQ8N431 466 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 DNAJC19Q96DA6 116 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 BORCS6Q96GS4 357 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 ZNF317Q96PQ6 595 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 CRAMP1Q96RY5 1269 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 RTFDC1Q9BY42 306 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 VCPKMTQ9H867 229 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 AJAP1Q9UKB5 411 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 B4DLN1 442 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 FCER1AP12319 257 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 KLRK1P26718 216 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 HSPA2P54652 639 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 APBA1Q02410 837 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 ACTN3Q08043 901 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 GRB10Q13322 594 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 PTGISQ16647 500 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 PREPLQ4J6C6 727 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 TMEM119Q4V9L6 283 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 NAA35Q5VZE5 725 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 SDR42E1Q8WUS8 393 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 GPR88Q9GZN0 384 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 TMBIM4Q9HC24 238 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 SIX2Q9NPC8 291 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 SCN9AQ15858 1988 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 ERICH2A1L162 156 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 DCDC2CA8MYV0 355 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 ATP6V1AP38606 617 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 CARSP49589 748 aaKnown RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 ZNF174Q15697 407 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 DDB1Q16531 1140 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 CCDC142Q17RM4 750 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 DCAF12L1Q5VU92 463 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 CPLX3Q8WVH0 158 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 MTFR1LQ9H019 292 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 LRWD1Q9UFC0 647 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 LOC102724159A0A0B4J2E5 919 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 MYO1FO00160 1098 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 TULP1O00294 542 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 NRDCO43847 1150 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 MGRN1O60291 552 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 LSP1P33241 339 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 JAM2P57087 298 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 DYNLL1P63167 89 aaKnown RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 CYP27A1Q02318 531 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 PLCB4Q15147 1175 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 PWP2Q15269 919 aaKnown RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 C11orf91Q3C1V1 193 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 TTC31Q49AM3 519 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 ALS2CLQ60I27 953 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 KCNK18Q7Z418 384 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 ZDHHC14Q8IZN3 488 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 STAG2Q8N3U4 1231 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 SH2D3CQ8N5H7 860 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 NEDD1Q8NHV4 660 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 CCT6BQ92526 530 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 SYN2Q92777 582 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 EPN3Q9H201 632 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 KCTD10Q9H3F6 313 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 ZDHHC18Q9NUE0 388 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 RNF216Q9NWF9 866 aaPredicted RBP6.06□□□□□ -1.44
VPS50-202ENST00000305866 PCDHA13Q9Y5I0 950 aa6.06□□□□□ -1.44
VPS50-202ENST00000305866 BRWD3Q6RI45 1802 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 CYP3A7-CYP3A51PA0A087WV96 503 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PHACTR2O75167 634 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 CYP3A7P24462 503 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 KIF5BP33176 963 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 MRPL12P52815 198 aaKnown RBP6.05□□□□□ -1.44
VPS50-202ENST00000305866 ERVK-9P63128 1117 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 PDIA5Q14554 519 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 SEPT2Q15019 361 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 CAVIN4Q5BKX8 364 aa6.05□□□□□ -1.44
VPS50-202ENST00000305866 IFIT1BQ5T764 474 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms