RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 POLR2MP0CAP2 368 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 HOXA13P31271 388 aaPredicted RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 TNFAIP2Q03169 654 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 GJC2Q5T442 439 aaPredicted RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 EEPD1Q7L9B9 569 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 KLHDC9Q8NEP7 349 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 HTATIP2Q9BUP3 242 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 UPF3AQ9H1J1 476 aaKnown RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 PXMP2Q9NR77 195 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 V9GY48 417 aaPredicted RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 SYNRGQ9UMZ2 1314 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 JAK2O60674 1132 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 PGK1P00558 417 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 GJA9P57773 515 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 PDE4DQ08499 809 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 CCSAPQ6IQ19 270 aaPredicted RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 NSUN7Q8NE18 718 aaKnown RBP14.49□□□□□ -0.09
SGCE-201ENST00000265735 Q9Y3F1 56 aa14.49□□□□□ -0.09
SGCE-201ENST00000265735 FRMPD4Q14CM0 1322 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 hCG_1984214I3L0E3 225 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 CTAGE5O15320 804 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 SMPD1P17405 629 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 CST5P28325 142 aaPredicted RBP14.48□□□□□ -0.09
SGCE-201ENST00000265735 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
SGCE-201ENST00000265735 FOXD4L6Q3SYB3 417 aaPredicted RBP14.48□□□□□ -0.09
SGCE-201ENST00000265735 TMEM63BQ5T3F8 832 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 FOXD4L3Q6VB84 417 aaPredicted RBP14.48□□□□□ -0.09
SGCE-201ENST00000265735 RNF180Q86T96 592 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 ZNF713Q8N859 430 aaPredicted RBP14.48□□□□□ -0.09
SGCE-201ENST00000265735 CHAMP1Q96JM3 812 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 PDCD2LQ9BRP1 358 aa14.48□□□□□ -0.09
SGCE-201ENST00000265735 H3BQV1 296 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 PRPF3O43395 683 aaKnown RBP14.47□□□□□ -0.09
SGCE-201ENST00000265735 NR3C2P08235 984 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 IFNAR1P17181 557 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 EIF2AK2P19525 551 aaKnown RBP14.47□□□□□ -0.09
SGCE-201ENST00000265735 STXBP2Q15833 593 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 DUSP28Q4G0W2 176 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 TEX2Q8IWB9 1127 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 GPKOWQ92917 476 aaPredicted RBP eCLIP14.47□□□□□ -0.09
SGCE-201ENST00000265735 TSEN34Q9BSV6 310 aaKnown RBP14.47□□□□□ -0.09
SGCE-201ENST00000265735 PSTPIP2Q9H939 334 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 PHF24Q9UPV7 400 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 PDE4DIPQ5VU43 2346 aa14.47□□□□□ -0.09
SGCE-201ENST00000265735 FSD2A1L4K1 749 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 KBTBD13C9JR72 458 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 EIF3JO75822 258 aaKnown RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 CTDNEP1O95476 244 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 IRX5P78411 483 aaPredicted RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 PGM5Q15124 567 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 PKN1Q16512 942 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 PFKFB3Q16875 520 aaPredicted RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 CCDC62Q6P9F0 684 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 USP17L6PQ6QN14 398 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 VSIG10LQ86VR7 867 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 FCHSD1Q86WN1 690 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 GPT2Q8TD30 523 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 SCFD2Q8WU76 684 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 WDR11Q9BZH6 1224 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 SENP6Q9GZR1 1112 aaPredicted RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 BARHL2Q9NY43 387 aa14.46□□□□□ -0.09
SGCE-201ENST00000265735 RBM27Q9P2N5 1060 aaKnown RBP14.46□□□□□ -0.09
SGCE-201ENST00000265735 MYADML2A6NDP7 307 aa14.46□□□□□ -0.1
SGCE-201ENST00000265735 STXBP3O00186 592 aa14.46□□□□□ -0.1
SGCE-201ENST00000265735 DTNBO60941 627 aa14.46□□□□□ -0.1
SGCE-201ENST00000265735 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.1
SGCE-201ENST00000265735 CAVIN1Q6NZI2 390 aaKnown RBP14.46□□□□□ -0.1
SGCE-201ENST00000265735 TLK2Q86UE8 772 aa14.46□□□□□ -0.1
SGCE-201ENST00000265735 SYAP1Q96A49 352 aaPredicted RBP14.46□□□□□ -0.1
SGCE-201ENST00000265735 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.1
SGCE-201ENST00000265735 ZSCAN16Q9H4T2 348 aaPredicted RBP14.46□□□□□ -0.1
SGCE-201ENST00000265735 DNAH12Q6ZR08 3092 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 CPLX1O14810 134 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 NKRFO15226 690 aaKnown RBP eCLIP14.45□□□□□ -0.1
SGCE-201ENST00000265735 RGS20O76081 388 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
SGCE-201ENST00000265735 SCG2P13521 617 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 PTGS1P23219 599 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 KRT85P78386 507 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 KCNA10Q16322 511 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 IL31RAQ8NI17 732 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 DPF3Q92784 378 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 CUL5Q93034 780 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 PHKBQ93100 1093 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 SPC25Q9HBM1 224 aa14.45□□□□□ -0.1
SGCE-201ENST00000265735 MOXD2PA6NHM9 499 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 DYNC1LI2O43237 492 aaPredicted RBP14.44□□□□□ -0.1
SGCE-201ENST00000265735 CDKL5O76039 1030 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 ARIH2O95376 493 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
SGCE-201ENST00000265735 ACLYP53396 1101 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 DNM1Q05193 864 aaKnown RBP14.44□□□□□ -0.1
SGCE-201ENST00000265735 SNX17Q15036 470 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 LRRC26Q2I0M4 334 aa14.44□□□□□ -0.1
SGCE-201ENST00000265735 GNASQ5JWF2 1037 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms