RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 TRIM37O94972 964 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDK4-201ENST00000257904 SLC7A5Q01650 507 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 TRAPPC3LQ5T215 181 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 CCDC181Q5TID7 509 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 TMEM47Q9BQJ4 181 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 CAPS2Q9BXY5 557 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 JAG2Q9Y219 1238 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
CDK4-201ENST00000257904 OPA1O60313 960 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 GOLGA8HP0CJ92 632 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 TNFRSF8P28908 595 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 CXCR5P32302 372 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 PSMB7Q99436 277 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 SPZ1Q9BXG8 430 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 FAM107BQ9H098 131 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 SMARCAL1Q9NZC9 954 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 STX8Q9UNK0 236 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 GRIN2DO15399 1336 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 CPP00450 1065 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
CDK4-201ENST00000257904 MAGEA1P43355 309 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
CDK4-201ENST00000257904 MRPS25P82663 173 aaKnown RBP18.8■□□□□ 0.6
CDK4-201ENST00000257904 SKIDA1Q1XH10 827 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 SV2BQ7L1I2 683 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 RRAGAQ7L523 313 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 BAP1Q92560 729 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 CAVIN3Q969G5 261 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 EHD2Q9NZN4 543 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 SALL4Q9UJQ4 1053 aa18.8■□□□□ 0.6
CDK4-201ENST00000257904 SMCO2A6NFE2 343 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 EIF3HO15372 352 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDK4-201ENST00000257904 GNA11P29992 359 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 PAFAH1B1P43034 410 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 CCT5P48643 541 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 ALS2CLQ60I27 953 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 SPTY2D1Q68D10 685 aaPredicted RBP18.79■□□□□ 0.6
CDK4-201ENST00000257904 UNC13DQ70J99 1090 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 ZNF444Q8N0Y2 327 aaPredicted RBP18.79■□□□□ 0.6
CDK4-201ENST00000257904 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 TSEN2Q8NCE0 465 aaKnown RBP18.79■□□□□ 0.6
CDK4-201ENST00000257904 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 BLOC1S4Q9NUP1 217 aa18.79■□□□□ 0.6
CDK4-201ENST00000257904 A0A087WUV0 522 aaPredicted RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 PVALEFA0A1B0GWK0 134 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 MYMKA6NI61 221 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 NCK2O43639 380 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 FGFR1OPO95684 399 aaKnown RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 GRB10Q13322 594 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 ASTE1Q2TB18 679 aaPredicted RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 TADA2BQ86TJ2 420 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 SH3RF3Q8TEJ3 882 aaPredicted RBP18.78■□□□□ 0.6
CDK4-201ENST00000257904 TLR10Q9BXR5 811 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 GNGT1P63211 74 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 C8orf74Q6P047 294 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 TXNRD3Q86VQ6 643 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 SLC44A5Q8NCS7 719 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 TBCKQ8TEA7 893 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
CDK4-201ENST00000257904 GFPT1Q06210 699 aaPredicted RBP18.77■□□□□ 0.6
CDK4-201ENST00000257904 SF3B2Q13435 895 aaKnown RBP18.77■□□□□ 0.6
CDK4-201ENST00000257904 GLE1Q53GS7 698 aaKnown RBP18.77■□□□□ 0.6
CDK4-201ENST00000257904 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
CDK4-201ENST00000257904 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
CDK4-201ENST00000257904 NOX5Q96PH1 765 aa18.77■□□□□ 0.6
CDK4-201ENST00000257904 RUFY1Q96T51 708 aa18.77■□□□□ 0.6
CDK4-201ENST00000257904 EHD4Q9H223 541 aa18.77■□□□□ 0.6
CDK4-201ENST00000257904 RBM12Q9NTZ6 932 aaKnown RBP18.77■□□□□ 0.6
CDK4-201ENST00000257904 SSU72P8A0A1W2PR75 194 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 EBAG9O00559 213 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 HSF2BPO75031 334 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 ADRA2BP18089 450 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 TXKP42681 527 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 NNTQ13423 1086 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 TTMPQ5BVD1 217 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 GPIHBP1Q8IV16 184 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 RNF10Q8N5U6 811 aaKnown RBP18.77■□□□□ 0.59
CDK4-201ENST00000257904 ANKRD13CQ8N6S4 541 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 BCAS4Q8TDM0 211 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 IPO4Q8TEX9 1081 aaKnown RBP18.77■□□□□ 0.59
CDK4-201ENST00000257904 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.59
CDK4-201ENST00000257904 PNMA5Q96PV4 448 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 EDEM3Q9BZQ6 932 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 TSKSQ9UJT2 592 aa18.77■□□□□ 0.59
CDK4-201ENST00000257904 RASA1P20936 1047 aa18.76■□□□□ 0.59
CDK4-201ENST00000257904 SLC1A4P43007 532 aa18.76■□□□□ 0.59
CDK4-201ENST00000257904 SKOR1P84550 965 aa18.76■□□□□ 0.59
CDK4-201ENST00000257904 RASSF7Q02833 373 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms