RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 TSNARE1Q96NA8 513 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 INTS9Q9NV88 658 aaKnown RBP22.76■■□□□ 1.23
FMR1-201ENST00000218200 USP17L8P0C7I0 530 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 LONP1P36776 959 aaKnown RBP22.76■■□□□ 1.23
FMR1-201ENST00000218200 RASA3Q14644 834 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 EXOC3L4Q17RC7 722 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 WDR44Q5JSH3 913 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 ZNF354CQ86Y25 554 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 CPDO75976 1380 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 PLCG1P19174 1290 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 ADCY8P40145 1251 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 LMNTD2Q8IXW0 634 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 MLXIPQ9HAP2 919 aa22.76■■□□□ 1.23
FMR1-201ENST00000218200 EPHB4P54760 987 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 SNX1Q13596 522 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 ANKRD20A3Q5VUR7 823 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 SYCE1Q8N0S2 351 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 TBCKQ8TEA7 893 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 NEDD4P46934 1319 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 KIF11P52732 1056 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 ZNF658Q5TYW1 1059 aaPredicted RBP22.75■■□□□ 1.23
FMR1-201ENST00000218200 NCK2O43639 380 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 LIFRP42702 1097 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 CCDC38Q502W7 563 aa22.75■■□□□ 1.23
FMR1-201ENST00000218200 DPP8Q6V1X1 898 aaPredicted RBP22.75■■□□□ 1.23
FMR1-201ENST00000218200 TADA3O75528 432 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 BANK1Q8NDB2 785 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 FEZ2Q9UHY8 353 aaPredicted RBP22.74■■□□□ 1.23
FMR1-201ENST00000218200 USP17L3A6NCW0 530 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 USP17L4A6NCW7 530 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 GUCY1A2P33402 732 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 TCP11X2Q5H9J9 407 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 RESP18Q5W5W9 173 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 USP17L1Q7RTZ2 530 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 EFCAB13Q8IY85 973 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 LARP4BQ92615 738 aaKnown RBP22.74■■□□□ 1.23
FMR1-201ENST00000218200 PANX2Q96RD6 677 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 RGPD8O14715 1765 aaPredicted RBP22.74■■□□□ 1.23
FMR1-201ENST00000218200 FAM205CA6NFA0 338 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 NMT2O60551 498 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 EEF1GP26641 437 aaKnown RBP22.74■■□□□ 1.23
FMR1-201ENST00000218200 ATP5DP30049 168 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 DIXDC1Q155Q3 683 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 CYP4F22Q6NT55 531 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 HOMER3Q9NSC5 361 aa22.74■■□□□ 1.23
FMR1-201ENST00000218200 POC1B-GALNT4F8VUJ3 575 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 ATF7P17544 494 aaPredicted RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 SARNPP82979 210 aaKnown RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 ZBED6P86452 979 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 CFAP157Q5JU67 520 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 OTUD6AQ7L8S5 288 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 KLHL14Q9P2G3 628 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 TTC26A0AVF1 554 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 HIP1RO75146 1068 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 CTDNEP1O95476 244 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 GAS8O95995 478 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 KAZNQ674X7 775 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 KIFAP3Q92845 792 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 CHP1Q99653 195 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 GGA1Q9UJY5 639 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 PACSIN2Q9UNF0 486 aaPredicted RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 FAM169AQ9Y6X4 670 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 DLATP10515 647 aaKnown RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 BCRP11274 1271 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 ATP2A2P16615 1042 aaKnown RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 NR1D1P20393 614 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 SEPT14Q6ZU15 432 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 NUCKS1Q9H1E3 243 aaKnown RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 ODF2LQ9ULJ1 636 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 ACTN3Q08043 901 aaPredicted RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 FYB2Q5VWT5 728 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 SPICE1Q8N0Z3 855 aa22.73■■□□□ 1.23
FMR1-201ENST00000218200 ARPP21Q9UBL0 812 aaPredicted RBP22.73■■□□□ 1.23
FMR1-201ENST00000218200 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.72■■□□□ 1.23
FMR1-201ENST00000218200 COL9A3Q14050 684 aaPredicted RBP22.72■■□□□ 1.23
FMR1-201ENST00000218200 ABHD10Q9NUJ1 306 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 CLUL1Q15846 466 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 TRIM10Q9UDY6 481 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 DDX25Q9UHL0 483 aaKnown RBP22.72■■□□□ 1.23
FMR1-201ENST00000218200 TNNI1P19237 187 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 SDCCAG8Q86SQ7 713 aaPredicted RBP22.72■■□□□ 1.23
FMR1-201ENST00000218200 MAK16Q9BXY0 300 aaKnown RBP22.72■■□□□ 1.23
FMR1-201ENST00000218200 MLXIPLQ9NP71 852 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 TFR2Q9UP52 801 aa22.72■■□□□ 1.23
FMR1-201ENST00000218200 THAP12O43422 761 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 PRCPP42785 496 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 TRIP13Q15645 432 aaPredicted RBP22.71■■□□□ 1.23
FMR1-201ENST00000218200 FAM178BQ8IXR5 827 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 RILPQ96NA2 401 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 GFPT2O94808 682 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 KIFC2Q96AC6 838 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 NDST4Q9H3R1 872 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 PCDHA13Q9Y5I0 950 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 KCNQ2O43526 872 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 FMR1Q06787 632 aaKnown RBP eCLIP22.71■■□□□ 1.23
FMR1-201ENST00000218200 NFRKBQ6P4R8 1299 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 METTL16Q86W50 562 aaKnown RBP22.71■■□□□ 1.23
FMR1-201ENST00000218200 NT5C3AQ9H0P0 336 aa22.71■■□□□ 1.23
FMR1-201ENST00000218200 CPSF2Q9P2I0 782 aaKnown RBP22.71■■□□□ 1.23
FMR1-201ENST00000218200 BAG2O95816 211 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms