RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 PLXNA1Q9UIW2 1896 aa16.45■□□□□ 0.22
SDHD-209ENST00000640554 TNRC18O15417 2968 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 STAM2O75886 525 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 CABYRO75952 493 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 NR3C2P08235 984 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 CPA1P15085 419 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 SMPD1P17405 629 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 ACLYP53396 1101 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 APOBRQ0VD83 1088 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 BRDTQ58F21 947 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 SLC39A5Q6ZMH5 540 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 IL17RAQ96F46 866 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 ZNF274Q96GC6 653 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 PSTPIP2Q9H939 334 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 COL20A1Q9P218 1284 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
SDHD-209ENST00000640554 ELP1O95163 1332 aa16.44■□□□□ 0.22
SDHD-209ENST00000640554 NID2Q14112 1375 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 DYNC1LI2O43237 492 aaPredicted RBP16.43■□□□□ 0.22
SDHD-209ENST00000640554 FUT2Q10981 343 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 SNX17Q15036 470 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 KCNA10Q16322 511 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 PPP1R18Q6NYC8 613 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 RAB11FIP4Q86YS3 637 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
SDHD-209ENST00000640554 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
SDHD-209ENST00000640554 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
SDHD-209ENST00000640554 V9GY48 417 aaPredicted RBP16.43■□□□□ 0.22
SDHD-209ENST00000640554 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
SDHD-209ENST00000640554 H0YGN5 161 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 KPNA6O60684 536 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 TGFB3P10600 412 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
SDHD-209ENST00000640554 HOXA13P31271 388 aaPredicted RBP16.42■□□□□ 0.22
SDHD-209ENST00000640554 ANKRD1Q15327 319 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
SDHD-209ENST00000640554 LRRC26Q2I0M4 334 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
SDHD-209ENST00000640554 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 ADCY6O43306 1168 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 ASGR1P07306 291 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 CDC27P30260 824 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 CCND2P30279 289 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 CPT1AP50416 773 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 PGM5Q15124 567 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 MCTP2Q6DN12 878 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 LENG1Q96BZ8 264 aaPredicted RBP16.41■□□□□ 0.22
SDHD-209ENST00000640554 TOX2Q96NM4 488 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 CNTNAP5Q8WYK1 1306 aa16.41■□□□□ 0.22
SDHD-209ENST00000640554 MKI67P46013 3256 aaKnown RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 MEIS2O14770 477 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 CTAGE5O15320 804 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 ATN1P54259 1190 aaPredicted RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 RTP1P59025 263 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 TOB2Q14106 344 aaPredicted RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 CPLX2Q6PUV4 134 aaKnown RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 C7orf61Q8IZ16 206 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 EHMT1Q9H9B1 1298 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 BARHL2Q9NY43 387 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
SDHD-209ENST00000640554 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 MROH7Q68CQ1 1323 aa16.4■□□□□ 0.22
SDHD-209ENST00000640554 SPDYE3A6NKU9 549 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
SDHD-209ENST00000640554 GH1P01241 217 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
SDHD-209ENST00000640554 IFNAR1P17181 557 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
SDHD-209ENST00000640554 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
SDHD-209ENST00000640554 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms