RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GGCXP38435 758 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 CNNM4Q6P4Q7 775 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 SND1Q7KZF4 910 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■□□□ 13.9
SCARB2-221ENST00000640341 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 NDST4Q9H3R1 872 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 M0R2N6 131 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 SLC37A4O43826 429 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 SLC16A2P36021 539 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 RASSF7Q02833 373 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 FLT1P17948 1338 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 LRRC53A6NM62 1247 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 KIF11P52732 1056 aa16.23■□□□□ 0.19
SCARB2-221ENST00000640341 GFPT1Q06210 699 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 CKAP4Q07065 602 aaKnown RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 CDCA7Q9BWT1 371 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 RTCBQ9Y3I0 505 aaKnown RBP16.23■□□□□ 0.19
SCARB2-221ENST00000640341 RFC4P35249 363 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 FAM71BQ8TC56 605 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 SELENOOQ9BVL4 669 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 ARHGAP20Q9P2F6 1191 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 MYO1CO00159 1063 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 TACC1O75410 805 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 ARHGEF1Q92888 912 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 MMTAG2Q9BU76 263 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 ZMYND12Q9H0C1 365 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 TMEM51Q9NW97 253 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 PCDHA13Q9Y5I0 950 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 CCDC40Q4G0X9 1142 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 MFSD14BQ5SR56 506 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
SCARB2-221ENST00000640341 DMGDHQ9UI17 866 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
SCARB2-221ENST00000640341 C6orf229H3BNL8 230 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 TRAF5O00463 557 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 MAGEA1P43355 309 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 VAV2P52735 878 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 NARFQ9UHQ1 456 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.19
SCARB2-221ENST00000640341 VWA3BQ502W6 1294 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 ZNF804AQ7Z570 1209 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 MS4A14Q96JA4 679 aa16.21■□□□□ 0.19
SCARB2-221ENST00000640341 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.19
SCARB2-221ENST00000640341 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
SCARB2-221ENST00000640341 RRP15Q9Y3B9 282 aaKnown RBP16.21■□□□□ 0.19
SCARB2-221ENST00000640341 TMEM266Q2M3C6 531 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 PAPD7Q5XG87 772 aaKnown RBP16.2■□□□□ 0.18
SCARB2-221ENST00000640341 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
SCARB2-221ENST00000640341 DDX12PQ92771 950 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 TTYH3Q9C0H2 523 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 HPCAL4Q9UM19 191 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 LDHCP07864 332 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 TUBB4BP68371 445 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 GSTO1P78417 241 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 MEA1Q16626 185 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 WDR93Q6P2C0 686 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 ZNF287Q9HBT7 754 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 FEZ2Q9UHY8 353 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-221ENST00000640341 PACSIN2Q9UNF0 486 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-221ENST00000640341 ESYT3A0FGR9 886 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 GRB10Q13322 594 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 DNAAF5Q86Y56 855 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 AK8Q96MA6 479 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 PLCH1Q4KWH8 1693 aa16.2■□□□□ 0.18
SCARB2-221ENST00000640341 GOLGA6BA6NDN3 693 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 LAD1O00515 517 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 SYF2O95926 243 aaKnown RBP16.19■□□□□ 0.18
SCARB2-221ENST00000640341 CCDC170Q8IYT3 715 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
SCARB2-221ENST00000640341 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 GALNT17Q6IS24 598 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 C7orf25Q9BPX7 421 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 BLOC1S4Q9NUP1 217 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 TM4SF1P30408 202 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
SCARB2-221ENST00000640341 TRIM58Q8NG06 486 aa16.19■□□□□ 0.18
SCARB2-221ENST00000640341 ARAP2Q8WZ64 1704 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 NPHP3-ACAD11A0A0J9YXS1 232 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 FTCDO95954 541 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 KRT18P05783 430 aaKnown RBP16.18■□□□□ 0.18
SCARB2-221ENST00000640341 MYL1P05976 194 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms