RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 IL31RAQ8NI17 732 aa19.07■□□□□ 0.64
COLCA2-207ENST00000639470 LRRC2Q9BYS8 371 aa19.07■□□□□ 0.64
COLCA2-207ENST00000639470 TXNP10599 105 aaKnown RBP19.06■□□□□ 0.64
COLCA2-207ENST00000639470 NT5C2P49902 561 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
COLCA2-207ENST00000639470 PPP2R5BQ15173 497 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 DNERQ8NFT8 737 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
COLCA2-207ENST00000639470 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 RMDN3Q96TC7 470 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.06■□□□□ 0.64
COLCA2-207ENST00000639470 LY9Q9HBG7 655 aa19.06■□□□□ 0.64
COLCA2-207ENST00000639470 TRMT13Q9NUP7 481 aaKnown RBP19.06■□□□□ 0.64
COLCA2-207ENST00000639470 ZBTB5O15062 677 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 CCL23P55773 120 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 CCDC62Q6P9F0 684 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 CMTR1Q8N1G2 835 aaKnown RBP19.05■□□□□ 0.64
COLCA2-207ENST00000639470 AMNQ9BXJ7 453 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 PNMA2Q9UL42 364 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 MRPL11Q9Y3B7 192 aaKnown RBP19.05■□□□□ 0.64
COLCA2-207ENST00000639470 Q9Y3F1 56 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 PCDHA1Q9Y5I3 950 aa19.05■□□□□ 0.64
COLCA2-207ENST00000639470 GRXCR1A8MXD5 290 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 PRC1O43663 620 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 CYP2C9P11712 490 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 HSD17B4P51659 736 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 CHMP4BP1P59074 171 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 CREB3L3Q68CJ9 461 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 SCFD2Q8WU76 684 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 WNT8AQ9H1J5 351 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 TTYH1Q9H313 450 aaPredicted RBP19.04■□□□□ 0.64
COLCA2-207ENST00000639470 RIOX1Q9H6W3 641 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 ANO2Q9NQ90 1003 aa19.04■□□□□ 0.64
COLCA2-207ENST00000639470 MROH7Q68CQ1 1323 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 RGS20O76081 388 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 PLEKHA8P1O95397 391 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 TMEM240Q5SV17 173 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 ARHGEF16Q5VV41 709 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 GPR153Q6NV75 609 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
COLCA2-207ENST00000639470 ZNF654Q8IZM8 581 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 NSUN6Q8TEA1 469 aaKnown RBP19.03■□□□□ 0.64
COLCA2-207ENST00000639470 AFG1LQ8WV93 481 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 GPKOWQ92917 476 aaPredicted RBP eCLIP19.03■□□□□ 0.64
COLCA2-207ENST00000639470 VWCEQ96DN2 955 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 NOC4LQ9BVI4 516 aaKnown RBP19.03■□□□□ 0.64
COLCA2-207ENST00000639470 ALDH8A1Q9H2A2 487 aaPredicted RBP19.03■□□□□ 0.64
COLCA2-207ENST00000639470 HIPK3Q9H422 1215 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 PXMP2Q9NR77 195 aa19.03■□□□□ 0.64
COLCA2-207ENST00000639470 LAMA2P24043 3122 aaKnown RBP19.02■□□□□ 0.64
COLCA2-207ENST00000639470 LOC102724159A0A0B4J2E5 919 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 hCG_1642624A0A1W2PR95 340 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 ERICH2A1L162 156 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.64
COLCA2-207ENST00000639470 TLR3O15455 904 aaKnown RBP19.02■□□□□ 0.64
COLCA2-207ENST00000639470 ZEB2O60315 1214 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 CABYRO75952 493 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 NR3C2P08235 984 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
COLCA2-207ENST00000639470 ARHGAP1Q07960 439 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 NECTIN1Q15223 517 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 PWP2Q15269 919 aaKnown RBP19.02■□□□□ 0.64
COLCA2-207ENST00000639470 NBPF20Q3BBV1 942 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 ZNF365Q70YC5 407 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 FCHSD1Q86WN1 690 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 MCF2L2Q86YR7 1114 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 SCLYQ96I15 445 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 TCEANC2Q96MN5 208 aa19.02■□□□□ 0.64
COLCA2-207ENST00000639470 FAM47CQ5HY64 1035 aa19.01■□□□□ 0.63
COLCA2-207ENST00000639470 CATIPQ7Z7H3 387 aa19.01■□□□□ 0.63
COLCA2-207ENST00000639470 PDCD2LQ9BRP1 358 aa19.01■□□□□ 0.63
COLCA2-207ENST00000639470 BCAS3Q9H6U6 928 aa19.01■□□□□ 0.63
COLCA2-207ENST00000639470 A6NJR5 290 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 PBX2P40425 430 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 CPT1AP50416 773 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 TTLL4Q14679 1199 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 STXBP2Q15833 593 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 BMP2KLQ5H9B9 411 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 MTG1Q9BT17 334 aaPredicted RBP19■□□□□ 0.63
COLCA2-207ENST00000639470 POLR3EQ9NVU0 708 aa19■□□□□ 0.63
COLCA2-207ENST00000639470 CXXC1Q9P0U4 656 aaPredicted RBP19■□□□□ 0.63
COLCA2-207ENST00000639470 BAZ2BQ9UIF8 2168 aaKnown RBP18.99■□□□□ 0.63
COLCA2-207ENST00000639470 MMP3P08254 477 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 GHRHRQ02643 423 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 SART3Q15020 963 aaKnown RBP18.99■□□□□ 0.63
COLCA2-207ENST00000639470 ZNF697Q5TEC3 545 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 RASEFQ8IZ41 740 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
COLCA2-207ENST00000639470 KAT2BQ92831 832 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 DDX41Q9UJV9 622 aaKnown RBP18.99■□□□□ 0.63
COLCA2-207ENST00000639470 TELO2Q9Y4R8 837 aa18.99■□□□□ 0.63
COLCA2-207ENST00000639470 COL6A3P12111 3177 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 NKRFO15226 690 aaKnown RBP eCLIP18.98■□□□□ 0.63
COLCA2-207ENST00000639470 SMAD3P84022 425 aaKnown RBP18.98■□□□□ 0.63
COLCA2-207ENST00000639470 SP2Q02086 613 aa18.98■□□□□ 0.63
COLCA2-207ENST00000639470 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■□□□ 12.8
COLCA2-207ENST00000639470 PGM5Q15124 567 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms