RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 RAB11FIP4Q86YS3 637 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 QPCTLQ9NXS2 382 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC5A4Q9NY91 659 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CCPG1Q9ULG6 757 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 R3HDM2Q9Y2K5 976 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 FHOD1Q9Y613 1164 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CDH23Q9H251 3354 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 THAP12O43422 761 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 EXTL3O43909 919 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 RPS6KA5O75582 802 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 SEC24DO94855 1032 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 KRT7P08729 469 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CORO7P57737 925 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 KRT83P78385 493 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 LMNB2Q03252 620 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CEBPZQ03701 1054 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CBX3Q13185 183 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 MOGSQ13724 837 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 NCCRP1Q6ZVX7 275 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CCT6BQ92526 530 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CASP10Q92851 521 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CUL5Q93034 780 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF653Q96CK0 615 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 FERD3LQ96RJ6 166 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 SRPK1Q96SB4 655 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 CORO1BQ9BR76 489 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 PPP1R12CQ9BZL4 782 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 TTLL3Q9Y4R7 772 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRC72A6NJI9 287 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ACSL4O60488 711 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FLOT1O75955 427 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PCP11498 1178 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 NCAM1P13591 858 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 KRT4P19013 534 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PTGS1P23219 599 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 HSD3B2P26439 372 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ALDH3A1P30838 453 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 HADHAP40939 763 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TSPAN7P41732 249 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ECE1P42892 770 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 NLRP12P59046 1061 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 UBE2HP62256 183 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 BOLA3Q53S33 107 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PHLDB2Q86SQ0 1253 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC50Q8IVM0 306 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 LILRB2Q8N423 598 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PPFIBP2Q8ND30 876 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CDC26Q8NHZ8 85 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SPIRE2Q8WWL2 714 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 NLRP7Q8WX94 980 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 RUFY2Q8WXA3 655 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SMARCE1Q969G3 411 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 INTS4Q96HW7 963 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FAM161BQ96MY7 647 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 NUF2Q9BZD4 464 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FOXP3Q9BZS1 431 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 STARD7Q9NQZ5 370 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FKBP14Q9NWM8 211 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 RASAL2Q9UJF2 1139 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC141Q6ZP82 1450 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TMEM232C9JQI7 657 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ZKSCAN1P17029 563 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF3P17036 446 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 CCT6AP40227 531 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 KIF5AQ12840 1032 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TMTC4Q5T4D3 741 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FBXW10Q5XX13 1052 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 INTS3Q68E01 1043 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SWSAP1Q6NVH7 229 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 HIBCHQ6NVY1 386 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 BICDL1Q6ZP65 573 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FAM200AQ8TCP9 573 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 FRS2Q8WU20 508 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 LZICQ8WZA0 190 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 RUBCNQ92622 972 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 NCLNQ969V3 563 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PGBD4Q96DM1 585 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ERBINQ96RT1 1412 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 ST7Q9NRC1 585 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TAGLN3Q9UI15 199 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 LCMT1Q9UIC8 334 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SH3BGRL2Q9UJC5 107 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 AGTPBP1Q9UPW5 1226 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 TMEM5Q9Y2B1 443 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 MRPL11Q9Y3B7 192 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PPP2R3BQ9Y5P8 575 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 DUOX2Q9NRD8 1548 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 MYO15AQ9UKN7 3530 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 EME2A4GXA9 379 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 PCP4L1A6NKN8 68 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 GNPATO15228 680 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SGSM2O43147 1006 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 SUPT3HO75486 399 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 S100A6P06703 90 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 RFC1P35251 1148 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 UBA7P41226 1012 aa4.26□□□□□ -1.73
R3HDM1-220ENST00000628915 LIG3P49916 1009 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms