RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
CHD2-212ENST00000627622 TTBK2Q6IQ55 1244 aa10.24□□□□□ -0.77
CHD2-212ENST00000627622 RETREG2Q8NC44 543 aa10.24□□□□□ -0.77
CHD2-212ENST00000627622 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
CHD2-212ENST00000627622 ANAPC4Q9UJX5 808 aa10.24□□□□□ -0.77
CHD2-212ENST00000627622 RAD50Q92878 1312 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 KIF28PB7ZC32 967 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 ORC4O43929 436 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 KPNA6O60684 536 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
CHD2-212ENST00000627622 PPP2R5BQ15173 497 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 RNF207Q6ZRF8 634 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 MPHOSPH6Q99547 160 aaKnown RBP10.23□□□□□ -0.77
CHD2-212ENST00000627622 PNMA2Q9UL42 364 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 COG5Q9UP83 839 aa10.23□□□□□ -0.77
CHD2-212ENST00000627622 COL4A4P53420 1690 aaPredicted RBP10.22□□□□□ -0.77
CHD2-212ENST00000627622 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 A6NJR5 290 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 FGRP09769 529 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 TOP1P11387 765 aaKnown RBP10.22□□□□□ -0.77
CHD2-212ENST00000627622 CALML3P27482 149 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 TAP1Q03518 808 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 PDE4DQ08499 809 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 BFSP2Q13515 415 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 HERC6Q8IVU3 1022 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 DNERQ8NFT8 737 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 SCFD2Q8WU76 684 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 CLEC4DQ8WXI8 215 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 TMEM47Q9BQJ4 181 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 FTOQ9C0B1 505 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHD2-212ENST00000627622 BRWD1Q9NSI6 2320 aa10.22□□□□□ -0.77
CHD2-212ENST00000627622 B4DLN1 442 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 BAIAP3O94812 1187 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 EDNRBP24530 442 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 MRPL12P52815 198 aaKnown RBP10.21□□□□□ -0.77
CHD2-212ENST00000627622 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.77
CHD2-212ENST00000627622 ALX1Q15699 326 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 VPS53Q5VIR6 699 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 KRT40Q6A162 431 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.77
CHD2-212ENST00000627622 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 ARNTL2Q8WYA1 636 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 TCP11L1Q9NUJ3 509 aa10.21□□□□□ -0.77
CHD2-212ENST00000627622 FRMPD2Q68DX3 1309 aaPredicted RBP10.21□□□□□ -0.77
CHD2-212ENST00000627622 SIP14410 1827 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 ARHGEF15O94989 841 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 TXNP10599 105 aaKnown RBP10.21□□□□□ -0.78
CHD2-212ENST00000627622 MX1P20591 662 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 DIEXFQ68CQ4 756 aaKnown RBP10.21□□□□□ -0.78
CHD2-212ENST00000627622 COPS5Q92905 334 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 HLA-CQ95604 372 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 NOD1Q9Y239 953 aa10.21□□□□□ -0.78
CHD2-212ENST00000627622 TLL1O43897 1013 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 PDHBP11177 359 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 KCNJ6P48051 423 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 GRB10Q13322 594 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 PTGISQ16647 500 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 RRP12Q5JTH9 1297 aaKnown RBP10.2□□□□□ -0.78
CHD2-212ENST00000627622 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 CAGE1Q8TC20 777 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 TTC14Q96N46 770 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
CHD2-212ENST00000627622 LPXNO60711 386 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 ARIH2O95376 493 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 FGAP02671 866 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 CHMP4BP1P59074 171 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 ZNF543Q08ER8 600 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 RGS22Q8NE09 1264 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 AFAP1L1Q8TED9 768 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 LRFN3Q9BTN0 628 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 EPHX3Q9H6B9 360 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 HELLSQ9NRZ9 838 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
CHD2-212ENST00000627622 SNHG28P0DPA3 235 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 WDR5P61964 334 aaKnown RBP10.19□□□□□ -0.78
CHD2-212ENST00000627622 CCDC62Q6P9F0 684 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 SESTD1Q86VW0 696 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 EVI5LQ96CN4 794 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 LMCD1Q9NZU5 365 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
CHD2-212ENST00000627622 SALL3Q9BXA9 1300 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 LCHNA4D1U4 455 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 PARNO95453 639 aaKnown RBP10.18□□□□□ -0.78
CHD2-212ENST00000627622 SELPP16109 830 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 GPNMBQ14956 572 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 USH1GQ495M9 461 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 GDF6Q6KF10 455 aaPredicted RBP10.18□□□□□ -0.78
CHD2-212ENST00000627622 MICAL3Q7RTP6 2002 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 MAF1Q9H063 256 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 HCN4Q9Y3Q4 1203 aa10.18□□□□□ -0.78
CHD2-212ENST00000627622 ZMYM6O95789 1325 aa10.17□□□□□ -0.78
CHD2-212ENST00000627622 GH1P01241 217 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms