RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DLGAP5Q15398 846 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 FAM151AQ8WW52 585 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 CDK5RAP3Q96JB5 506 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 NUP88Q99567 741 aaPredicted RBP22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 AMNQ9BXJ7 453 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 VPS33BQ9H267 617 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 ZNF277Q9NRM2 450 aaPredicted RBP22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 ZNF70Q9UC06 446 aaPredicted RBP22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 COL4A5P29400 1685 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 ZSCAN12O43309 604 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 BMP3P12645 472 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 RBL2Q08999 1139 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 AP3B2Q13367 1082 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 COBLL1Q53SF7 1204 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 SYDE2Q5VT97 1194 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 TTI2Q6NXR4 508 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 BTNL9Q6UXG8 535 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 REXO1L1PQ8IX06 675 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 OGFOD1Q8N543 542 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 SNX29Q8TEQ0 813 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 LARP4BQ92615 738 aaKnown RBP22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 THAP9Q9H5L6 903 aa22.1■■□□□ 1.13
PCDHB11-202ENST00000624887 CLRN2A0PK11 232 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 MEIS2O14770 477 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 TMEM119Q4V9L6 283 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 MCTP2Q6DN12 878 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 ANO3Q9BYT9 981 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 VPS16Q9H269 839 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 TAB2Q9NYJ8 693 aa22.09■■□□□ 1.13
PCDHB11-202ENST00000624887 A0A1W2PRG0 241 aa22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 EEF1GP26641 437 aaKnown RBP22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 STK4Q13043 487 aa22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 CNNM4Q6P4Q7 775 aa22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 NOC3LQ8WTT2 800 aaKnown RBP22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 NUDT12Q9BQG2 462 aa22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 PPP2R2CQ9Y2T4 447 aa22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 GOLGB1Q14789 3259 aaKnown RBP22.08■■□□□ 1.13
PCDHB11-202ENST00000624887 CYP3A7-CYP3A51PA0A087WV96 503 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 PVALEFA0A1B0GWK0 134 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 MYMKA6NI61 221 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 CYP3A7P24462 503 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 MCM6Q14566 821 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 SPDYE2Q495Y8 402 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 FBXO11Q86XK2 927 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 RAD54LQ92698 747 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 TRIM47Q96LD4 638 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 MBOAT7Q96N66 472 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 NAA15Q9BXJ9 866 aaKnown RBP22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 PCDHA12Q9UN75 941 aa22.08■■□□□ 1.12
PCDHB11-202ENST00000624887 BICDL2A1A5D9 508 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 MFAP3LO75121 409 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 GYPCP04921 128 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CCNE1P24864 410 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 IKQ13123 557 aaPredicted RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 MOXD1Q6UVY6 613 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 MTERF4Q7Z6M4 381 aaKnown RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CNGA4Q8IV77 575 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 P2RX5Q93086 422 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CD2APQ9Y5K6 639 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CNTNAP1P78357 1384 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 MARCH6O60337 910 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 ETF1P62495 437 aaKnown RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 FKBP1CQ5VVH2 108 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 UNC13DQ70J99 1090 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CRYGNQ8WXF5 182 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 CCDC51Q96ER9 411 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 DUSP9Q99956 384 aaKnown RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 SRRTQ9BXP5 876 aaKnown RBP22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 LRRC27Q9C0I9 530 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 KCNMB3Q9NPA1 279 aa22.07■■□□□ 1.12
PCDHB11-202ENST00000624887 FCER1AP12319 257 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 MMP14P50281 582 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 SYCP1Q15431 976 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 HYIQ5T013 277 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 SYT10Q6XYQ8 523 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 ZNF710Q8N1W2 664 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 MTMR14Q8NCE2 650 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 ARHGEF10LQ9HCE6 1279 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 ZNRF3Q9ULT6 936 aa22.06■■□□□ 1.12
PCDHB11-202ENST00000624887 GOLGA6L9A6NEM1 432 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 TPM1P09493 284 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 CASP14P31944 242 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 SNAP25P60880 206 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 TRIM14Q14142 442 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 TRIM65Q6PJ69 517 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 CREBRFQ8IUR6 639 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 KIAA0895Q8NCT3 520 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 AGBL3Q8NEM8 1001 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 CPLX3Q8WVH0 158 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 FECHP22830 423 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 PTGER2P43116 358 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 FXR1P51114 621 aaKnown RBP eCLIP22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 TOGARAM2Q6ZUX3 1019 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 KCNK18Q7Z418 384 aa22.05■■□□□ 1.12
PCDHB11-202ENST00000624887 CSGALNACT2Q8N6G5 542 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms