RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PRDX5P30044 214 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 RASGRP2Q7LDG7 609 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 TRIM42Q8IWZ5 723 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 NELFBQ8WX92 580 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
LITAF-221ENST00000622633 GRIN2DO15399 1336 aa13.8□□□□□ -0.2
LITAF-221ENST00000622633 STRCQ7RTU9 1775 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 ABL1P00519 1130 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
LITAF-221ENST00000622633 CNGA4Q8IV77 575 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 FAM81AQ8TBF8 368 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 RASGRP4Q8TDF6 673 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
LITAF-221ENST00000622633 RWDD2AQ9UIY3 292 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 GDAQ9Y2T3 454 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 TAF1P21675 1872 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
LITAF-221ENST00000622633 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 SPATA31A1Q5TZJ5 1347 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 MAGEA10P43363 369 aaPredicted RBP13.79□□□□□ -0.2
LITAF-221ENST00000622633 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 CHMP4BP1P59074 171 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 VSNL1P62760 191 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 ERVK-24P63145 666 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 PAK1Q13153 545 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 CLEC4GQ6UXB4 293 aa13.79□□□□□ -0.2
LITAF-221ENST00000622633 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
LITAF-221ENST00000622633 RSRC1Q96IZ7 334 aaKnown RBP13.79□□□□□ -0.2
LITAF-221ENST00000622633 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 GOLGA6BA6NDN3 693 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
LITAF-221ENST00000622633 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
LITAF-221ENST00000622633 RPN1P04843 607 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 HIBADHP31937 336 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 RPS8P62241 208 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 KIF4BQ2VIQ3 1234 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 PARP9Q8IXQ6 854 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 YIPF3Q9GZM5 350 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 ATP8A2Q9NTI2 1148 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 ITIH6Q6UXX5 1313 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 KCNJ18B7U540 433 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 ARHGAP25P42331 645 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 PRCPP42785 496 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 KCNJ12Q14500 433 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 TCP11X2Q5H9J9 407 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 TBC1D9BQ66K14 1250 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 BZW1Q7L1Q6 419 aaKnown RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 SRGAP1Q7Z6B7 1085 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 SLC35F6Q8N357 371 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 HOOK2Q96ED9 719 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 CCDC51Q96ER9 411 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 BICD1Q96G01 975 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
LITAF-221ENST00000622633 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
LITAF-221ENST00000622633 TFAP4Q01664 338 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 PLCB4Q15147 1175 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 ACCSLQ4AC99 568 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 B4GALNT4Q76KP1 1039 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 TMTC1Q8IUR5 882 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 CCDC13Q8IYE1 715 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
LITAF-221ENST00000622633 ABHD10Q9NUJ1 306 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 CDC23Q9UJX2 597 aa13.77□□□□□ -0.21
LITAF-221ENST00000622633 TPX2Q9ULW0 747 aaKnown RBP13.77□□□□□ -0.21
LITAF-221ENST00000622633 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
LITAF-221ENST00000622633 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 KIF5BP33176 963 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 STAT6P42226 847 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 ARHGAP22Q7Z5H3 698 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 DYNLL2Q96FJ2 89 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 PLIN2Q99541 437 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 PYM1Q9BRP8 204 aaKnown RBP13.76□□□□□ -0.21
LITAF-221ENST00000622633 VIPAS39Q9H9C1 493 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 CTAGE9A4FU28 777 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 FECHP22830 423 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 CALML3P27482 149 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms