RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 B4DLN1 442 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 TLR3O15455 904 aaKnown RBP19.95■□□□□ 0.78
HMGN3-203ENST00000620514 CD4P01730 458 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 EIF2AK2P19525 551 aaKnown RBP19.95■□□□□ 0.78
HMGN3-203ENST00000620514 MRPL12P52815 198 aaKnown RBP19.95■□□□□ 0.78
HMGN3-203ENST00000620514 NSUN6Q8TEA1 469 aaKnown RBP19.95■□□□□ 0.78
HMGN3-203ENST00000620514 RMDN3Q96TC7 470 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 MYL10Q9BUA6 226 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 MAF1Q9H063 256 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 LY9Q9HBG7 655 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 ANO2Q9NQ90 1003 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 PCDHA1Q9Y5I3 950 aa19.95■□□□□ 0.78
HMGN3-203ENST00000620514 BAZ2BQ9UIF8 2168 aaKnown RBP19.94■□□□□ 0.78
HMGN3-203ENST00000620514 PRC1O43663 620 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 MYL3P08590 195 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 TXNP10599 105 aaKnown RBP19.94■□□□□ 0.78
HMGN3-203ENST00000620514 HSD17B4P51659 736 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 NECTIN1Q15223 517 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 CREB3L3Q68CJ9 461 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 CATIPQ7Z7H3 387 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 PPP1R12CQ9BZL4 782 aa19.94■□□□□ 0.78
HMGN3-203ENST00000620514 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.78
HMGN3-203ENST00000620514 CPT1AP50416 773 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 PURAQ00577 322 aaKnown RBP19.93■□□□□ 0.78
HMGN3-203ENST00000620514 ARHGEF16Q5VV41 709 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 MFSD5Q6N075 450 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 SEPT14Q6ZU15 432 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 PIBF1Q8WXW3 757 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 TRPV6Q9H1D0 765 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 POLR3EQ9NVU0 708 aa19.93■□□□□ 0.78
HMGN3-203ENST00000620514 HOXA13P31271 388 aaPredicted RBP19.92■□□□□ 0.78
HMGN3-203ENST00000620514 GHRHRQ02643 423 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 TTLL4Q14679 1199 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 STXBP2Q15833 593 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 CCDC62Q6P9F0 684 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 CASC1Q6TDU7 716 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 ZNF654Q8IZM8 581 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 PPP1R13LQ8WUF5 828 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 IWS1Q96ST2 819 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 PXMP2Q9NR77 195 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 MTMR10Q9NXD2 777 aa19.92■□□□□ 0.78
HMGN3-203ENST00000620514 SH2B2O14492 632 aaPredicted RBP19.91■□□□□ 0.78
HMGN3-203ENST00000620514 B4GALT4O60513 344 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 NR3C2P08235 984 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 CSF2RAP15509 400 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 CYP2C18P33260 490 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 MCM5P33992 734 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 LY6KQ17RY6 165 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 RNPC3Q96LT9 517 aaKnown RBP19.91■□□□□ 0.78
HMGN3-203ENST00000620514 UMODL1Q5DID0 1318 aa19.91■□□□□ 0.78
HMGN3-203ENST00000620514 PNMA6FA0A0J9YX94 578 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 A6NJR5 290 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 C16orf59Q7L2K0 433 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 FAM161BQ96MY7 647 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.781e-12■■□□□ 13.1
HMGN3-203ENST00000620514 MTG1Q9BT17 334 aaPredicted RBP19.9■□□□□ 0.78
HMGN3-203ENST00000620514 MTA3Q9BTC8 594 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 LRRC2Q9BYS8 371 aa19.9■□□□□ 0.78
HMGN3-203ENST00000620514 ALDH8A1Q9H2A2 487 aaPredicted RBP19.9■□□□□ 0.78
HMGN3-203ENST00000620514 DDAH1O94760 285 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 RXRAP19793 462 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 ARHGAP1Q07960 439 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 PPIGQ13427 754 aaKnown RBP eCLIP19.89■□□□□ 0.771e-8■■□□□ 12.2
HMGN3-203ENST00000620514 BRDTQ58F21 947 aaPredicted RBP19.89■□□□□ 0.77
HMGN3-203ENST00000620514 NFXL1Q6ZNB6 911 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 RAB11FIP4Q86YS3 637 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 IL31RAQ8NI17 732 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 CTCFLQ8NI51 663 aaPredicted RBP19.89■□□□□ 0.77
HMGN3-203ENST00000620514 AFG1LQ8WV93 481 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 TMEM87BQ96K49 555 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 MAP3K14Q99558 947 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 PDCD2LQ9BRP1 358 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 SEZ6LQ9BYH1 1024 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 HIPK3Q9H422 1215 aa19.89■□□□□ 0.77
HMGN3-203ENST00000620514 TRMT13Q9NUP7 481 aaKnown RBP19.89■□□□□ 0.77
HMGN3-203ENST00000620514 KIAA1217Q5T5P2 1943 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 GCOM1H8Y6P7 765 aaPredicted RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 EIF3JO75822 258 aaKnown RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 PLEKHA8P1O95397 391 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 POLR2MP0CAP2 368 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 ACRP10323 421 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 MYCLP12524 364 aaPredicted RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 NBPF20Q3BBV1 942 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 FAM109BQ6ICB4 259 aaPredicted RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 FCHSD1Q86WN1 690 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 TMEM199Q8N511 208 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 ZFP91Q96JP5 570 aaPredicted RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 NOC4LQ9BVI4 516 aaKnown RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 SPZ1Q9BXG8 430 aa19.88■□□□□ 0.77
HMGN3-203ENST00000620514 MAP3K20Q9NYL2 800 aaKnown RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 DDX41Q9UJV9 622 aaKnown RBP19.88■□□□□ 0.77
HMGN3-203ENST00000620514 SCN10AQ9Y5Y9 1956 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 CCDC69A6NI79 296 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 CDC45O75419 566 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 RGS20O76081 388 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 GH1P01241 217 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 MMP3P08254 477 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 CCL23P55773 120 aa19.87■□□□□ 0.77
HMGN3-203ENST00000620514 SMAD3P84022 425 aaKnown RBP19.87■□□□□ 0.77
HMGN3-203ENST00000620514 TRAF1Q13077 416 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms