RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-218ENST00000617172 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-218ENST00000617172 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
TARDBP-218ENST00000617172 TMEM265A0A087WTH1 108 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 EIF3JO75822 258 aaKnown RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 CFBP00751 764 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 MYL3P08590 195 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 HSD17B4P51659 736 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 EPHB4P54760 987 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 GHRHRQ02643 423 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 TROAPQ12815 778 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 GRM4Q14833 912 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 TMEM63BQ5T3F8 832 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 PSRC1Q6PGN9 363 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 TBC1D5Q92609 795 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 MAP3K14Q99558 947 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 ALDH8A1Q9H2A2 487 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 SEMA6BQ9H3T3 888 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 RIOX1Q9H6W3 641 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
TARDBP-218ENST00000617172 GRIN2DO15399 1336 aa11.24□□□□□ -0.61
TARDBP-218ENST00000617172 PNMA6FA0A0J9YX94 578 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 B4GALT4O60513 344 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 GH1P01241 217 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 NR3C2P08235 984 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 CSF2RAP15509 400 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 PSMC6P62333 389 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 PTPN11Q06124 597 aaPredicted RBP11.23□□□□□ -0.61
TARDBP-218ENST00000617172 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 TMEM240Q5SV17 173 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 SEPT14Q6ZU15 432 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.611e-11■■□□□ 11.7
TARDBP-218ENST00000617172 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 TRPV6Q9H1D0 765 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 IL23AQ9NPF7 189 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 COL6A3P12111 3177 aa11.23□□□□□ -0.61
TARDBP-218ENST00000617172 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-218ENST00000617172 FGBP02675 491 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
TARDBP-218ENST00000617172 PTGS1P23219 599 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 SMARCA1P28370 1054 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 KIF5BP33176 963 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 CYP2C18P33260 490 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 MCM5P33992 734 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 GNAQP50148 359 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 ZNF365Q70YC5 407 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 C16orf59Q7L2K0 433 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-218ENST00000617172 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-218ENST00000617172 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
TARDBP-218ENST00000617172 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 COL20A1Q9P218 1284 aa11.22□□□□□ -0.61
TARDBP-218ENST00000617172 MCM3APO60318 1980 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 LTBP2Q14767 1821 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 OPLAHO14841 1288 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 DDAH1O94760 285 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 ARIH2O95376 493 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 PFKMP08237 780 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 TGFB3P10600 412 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 EIF2AK2P19525 551 aaKnown RBP11.21□□□□□ -0.61
TARDBP-218ENST00000617172 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 DGKDQ16760 1214 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 CHST3Q7LGC8 479 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.61
TARDBP-218ENST00000617172 HERVK_113Q902F9 699 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 COPS5Q92905 334 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
TARDBP-218ENST00000617172 FAM161BQ96MY7 647 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 GUCD1Q96NT3 240 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 PIGSQ96S52 555 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
TARDBP-218ENST00000617172 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.61
TARDBP-218ENST00000617172 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
TARDBP-218ENST00000617172 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 PPP1R11O60927 126 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-218ENST00000617172 STAM2O75886 525 aa11.2□□□□□ -0.62
TARDBP-218ENST00000617172 CALM1P0DP23 149 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms