RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CPVLQ9H3G5 476 aa20.91■□□□□ 0.94
SMN2-213ENST00000614240 DIAPH3Q9NSV4 1193 aa20.91■□□□□ 0.94
SMN2-213ENST00000614240 PCDHA11Q9Y5I1 949 aa20.91■□□□□ 0.94
SMN2-213ENST00000614240 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
SMN2-213ENST00000614240 KDM4AO75164 1064 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 MYOGP15173 224 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 EDNRBP24530 442 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 CDC37Q16543 378 aaPredicted RBP20.9■□□□□ 0.94
SMN2-213ENST00000614240 NFRKBQ6P4R8 1299 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 CWC27Q6UX04 472 aaKnown RBP20.9■□□□□ 0.94
SMN2-213ENST00000614240 PNMA1Q8ND90 353 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 PPP1R13LQ8WUF5 828 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 ATXN2LQ8WWM7 1075 aaKnown RBP20.9■□□□□ 0.94
SMN2-213ENST00000614240 THEGQ9P2T0 379 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 LCTP09848 1927 aa20.9■□□□□ 0.94
SMN2-213ENST00000614240 A6NJR5 290 aa20.89■□□□□ 0.93
SMN2-213ENST00000614240 AAMPQ13685 434 aa20.89■□□□□ 0.93
SMN2-213ENST00000614240 RGS22Q8NE09 1264 aa20.89■□□□□ 0.93
SMN2-213ENST00000614240 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
SMN2-213ENST00000614240 FTOQ9C0B1 505 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMN2-213ENST00000614240 UNC80Q8N2C7 3258 aa20.89■□□□□ 0.93
SMN2-213ENST00000614240 ABCB11O95342 1321 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 RFC2P35250 354 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 NT5C2P49902 561 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 PTPN11Q06124 597 aaPredicted RBP20.88■□□□□ 0.93
SMN2-213ENST00000614240 TMEM67Q5HYA8 995 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 SEPT14Q6ZU15 432 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 MCF2L2Q86YR7 1114 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 MICALL1Q8N3F8 863 aa20.88■□□□□ 0.93
SMN2-213ENST00000614240 TSPYL2Q9H2G4 693 aaPredicted RBP20.88■□□□□ 0.93
SMN2-213ENST00000614240 TNFRSF10AO00220 468 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 MRPS5P82675 430 aaKnown RBP20.87■□□□□ 0.93
SMN2-213ENST00000614240 BFSP2Q13515 415 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 PLEKHM2Q8IWE5 1019 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 SMC5Q8IY18 1101 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 ADGRF4Q8IZF3 695 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 NSUN6Q8TEA1 469 aaKnown RBP20.87■□□□□ 0.93
SMN2-213ENST00000614240 ASB2Q96Q27 587 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 ZSCAN10Q96SZ4 725 aaPredicted RBP20.87■□□□□ 0.93
SMN2-213ENST00000614240 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
SMN2-213ENST00000614240 B4E1Z4 1266 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 HIP1O00291 1037 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 PITPNM1O00562 1244 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 ARIH2O95376 493 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 GH1P01241 217 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 IQCF3P0C7M6 154 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 AFG1LQ8WV93 481 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 TBC1D5Q92609 795 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 VWCEQ96DN2 955 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 TAAR1Q96RJ0 339 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 MAF1Q9H063 256 aa20.86■□□□□ 0.93
SMN2-213ENST00000614240 MYO9BQ13459 2157 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 PARP1P09874 1014 aaKnown RBP20.85■□□□□ 0.93
SMN2-213ENST00000614240 STXBP2Q15833 593 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 PTGISQ16647 500 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
SMN2-213ENST00000614240 LY6KQ17RY6 165 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 CCDC155Q8N6L0 562 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 SYTL5Q8TDW5 730 aaPredicted RBP20.85■□□□□ 0.93
SMN2-213ENST00000614240 SLC9A7Q96T83 725 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 RMDN3Q96TC7 470 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 CTNNA3Q9UI47 895 aa20.85■□□□□ 0.93
SMN2-213ENST00000614240 MRPL11Q9Y3B7 192 aaKnown RBP20.85■□□□□ 0.93
SMN2-213ENST00000614240 CA3P07451 260 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 CCDC62Q6P9F0 684 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 ANKS1AQ92625 1134 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 IWS1Q96ST2 819 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 KRT23Q9C075 422 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 OSBPL3Q9H4L5 887 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 ZSWIM5Q9P217 1185 aa20.84■□□□□ 0.93
SMN2-213ENST00000614240 KIF28PB7ZC32 967 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 MMP3P08254 477 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 CASTP20810 708 aaKnown RBP20.83■□□□□ 0.93
SMN2-213ENST00000614240 NUCB1Q02818 461 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 SKIV2LQ15477 1246 aaKnown RBP20.83■□□□□ 0.93
SMN2-213ENST00000614240 ENAHQ8N8S7 591 aaPredicted RBP20.83■□□□□ 0.93
SMN2-213ENST00000614240 PHOSPHO2Q8TCD6 241 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 ADAMTS19Q8TE59 1207 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 DSCC1Q9BVC3 393 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 CERS4Q9HA82 394 aa20.83■□□□□ 0.93
SMN2-213ENST00000614240 GTPBP6O43824 516 aaPredicted RBP20.82■□□□□ 0.92
SMN2-213ENST00000614240 CFBP00751 764 aa20.82■□□□□ 0.92
SMN2-213ENST00000614240 IGHDP01880 384 aa20.82■□□□□ 0.92
SMN2-213ENST00000614240 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
SMN2-213ENST00000614240 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
SMN2-213ENST00000614240 COL20A1Q9P218 1284 aa20.82■□□□□ 0.92
SMN2-213ENST00000614240 TTC28Q96AY4 2481 aa20.82■□□□□ 0.92
SMN2-213ENST00000614240 KCNJ6P48051 423 aa20.81■□□□□ 0.92
SMN2-213ENST00000614240 ARHGAP1Q07960 439 aa20.81■□□□□ 0.92
SMN2-213ENST00000614240 DGKDQ16760 1214 aa20.81■□□□□ 0.92
SMN2-213ENST00000614240 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
SMN2-213ENST00000614240 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
SMN2-213ENST00000614240 JMJD4Q9H9V9 463 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms