RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 PNPLA7Q6ZV29 1317 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 ZPR1O75312 459 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 HSPA9P38646 679 aaKnown RBP18.34■□□□□ 0.53
TSKU-205ENST00000612930 RASGRF1Q13972 1273 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 TEX11Q8IYF3 940 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 LPIN2Q92539 896 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 KRT12Q99456 494 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 LEMD3Q9Y2U8 911 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 TRAPPC3O43617 180 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 GNAT2P19087 354 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 RASSF7Q02833 373 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 TROAPQ12815 778 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 CRYMQ14894 314 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 E2F5Q15329 346 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 CDC37Q16543 378 aaPredicted RBP18.34■□□□□ 0.53
TSKU-205ENST00000612930 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
TSKU-205ENST00000612930 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 SIK3Q9Y2K2 1263 aa18.34■□□□□ 0.53
TSKU-205ENST00000612930 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 MINDY4BA8MYZ0 360 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 OPLAHO14841 1288 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 PPP2R5AQ15172 486 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 CCDC50Q8IVM0 306 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 ESR2Q92731 530 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 ZSCAN10Q96SZ4 725 aaPredicted RBP18.33■□□□□ 0.53
TSKU-205ENST00000612930 FAM207AQ9NSI2 230 aaPredicted RBP18.33■□□□□ 0.53
TSKU-205ENST00000612930 RNF14Q9UBS8 474 aa18.33■□□□□ 0.53
TSKU-205ENST00000612930 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.53
TSKU-205ENST00000612930 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 SCTRP47872 440 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 NLRP5P59047 1200 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 GFPT1Q06210 699 aaPredicted RBP18.33■□□□□ 0.52
TSKU-205ENST00000612930 CATIPQ7Z7H3 387 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 SRBD1Q8N5C6 995 aaKnown RBP18.33■□□□□ 0.52
TSKU-205ENST00000612930 C3orf20Q8ND61 904 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 SEC16BQ96JE7 1060 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 NOX5Q96PH1 765 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 PLCB1Q9NQ66 1216 aa18.33■□□□□ 0.52
TSKU-205ENST00000612930 RBM28Q9NW13 759 aaKnown RBP18.33■□□□□ 0.52
TSKU-205ENST00000612930 H0YGN5 161 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 TMOD1P28289 359 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 ASTE1Q2TB18 679 aaPredicted RBP18.32■□□□□ 0.52
TSKU-205ENST00000612930 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 FAM114A1Q8IWE2 563 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 OR2W6PQ8NHA6 318 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 NFS1Q9Y697 457 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 LRRC53A6NM62 1247 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 BACH1O14867 736 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 RTN2O75298 545 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 SLC1A4P43007 532 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 DNA2P51530 1060 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 STK4Q13043 487 aa18.32■□□□□ 0.52
TSKU-205ENST00000612930 IFIT1BQ5T764 474 aaKnown RBP18.32■□□□□ 0.52
TSKU-205ENST00000612930 SNAP23O00161 211 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 RAD51CO43502 376 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 EZRP15311 586 aaKnown RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 FGFR2P21802 821 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 CLNS1AP54105 237 aaKnown RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 XRCC4Q13426 336 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 LACTB2Q53H82 288 aaPredicted RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 LRIG3Q6UXM1 1119 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 BICDL2A1A5D9 508 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 HSD17B3P37058 310 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 UAP1Q16222 522 aaPredicted RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 RRAGAQ7L523 313 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 RNF10Q8N5U6 811 aaKnown RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 RASSF8Q8NHQ8 419 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 SDR42E1Q8WUS8 393 aa18.31■□□□□ 0.52
TSKU-205ENST00000612930 CNOT8Q9UFF9 292 aaKnown RBP18.31■□□□□ 0.52
TSKU-205ENST00000612930 NEBLO76041 1014 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 MYL1P05976 194 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 MYBP10242 640 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 ECHS1P30084 290 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 CTSWP56202 376 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 KIRREL3Q8IZU9 778 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 IQCDQ96DY2 449 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 FRMD3A2A2Y4 597 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
TSKU-205ENST00000612930 PPP1R12AO14974 1030 aaPredicted RBP18.3■□□□□ 0.52
TSKU-205ENST00000612930 MYZAPP0CAP1 466 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 FCER1AP12319 257 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
TSKU-205ENST00000612930 PDE4DQ08499 809 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 BAP1Q92560 729 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
TSKU-205ENST00000612930 FAM205AQ6ZU69 1335 aa18.3■□□□□ 0.52
TSKU-205ENST00000612930 GOLGA6L10A6NI86 522 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 MGRN1O60291 552 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms