RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TMEM63BQ5T3F8 832 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 SLC43A3Q8NBI5 491 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 LY9Q9HBG7 655 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 POLR3EQ9NVU0 708 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 PNMA6FA0A0J9YX94 578 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 CDC45O75419 566 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 CFBP00751 764 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 SMARCA1P28370 1054 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 KIF5BP33176 963 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 LIFRP42702 1097 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 TTLL4Q14679 1199 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 STXBP2Q15833 593 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 HOMER1Q86YM7 354 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 FAM126BQ8IXS8 530 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 ZNF654Q8IZM8 581 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 CTCFLQ8NI51 663 aaPredicted RBP21.13■□□□□ 0.97
VCX3A-203ENST00000612369 PIGSQ96S52 555 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 COL20A1Q9P218 1284 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 TBX21Q9UL17 535 aa21.13■□□□□ 0.97
VCX3A-203ENST00000612369 OPLAHO14841 1288 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 PPP1R11O60927 126 aaPredicted RBP21.12■□□□□ 0.97
VCX3A-203ENST00000612369 TIMP1P01033 207 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 TXNP10599 105 aaKnown RBP21.12■□□□□ 0.97
VCX3A-203ENST00000612369 ITGB8P26012 769 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 ITGA7Q13683 1181 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 SLC35G1Q2M3R5 365 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 ARHGEF16Q5VV41 709 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 OR6J1Q8NGC5 347 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 LZTS2Q9BRK4 669 aa21.12■□□□□ 0.97
VCX3A-203ENST00000612369 CCDC69A6NI79 296 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 SH2B2O14492 632 aaPredicted RBP21.11■□□□□ 0.97
VCX3A-203ENST00000612369 CYTH3O43739 400 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 KPNA6O60684 536 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 PTGS1P23219 599 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 GNAQP50148 359 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 PXMP2Q9NR77 195 aa21.11■□□□□ 0.97
VCX3A-203ENST00000612369 A6NJR5 290 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 EIF3JO75822 258 aaKnown RBP21.1■□□□□ 0.97
VCX3A-203ENST00000612369 CD4P01730 458 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 CALM1P0DP23 149 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 CALM2P0DP24 149 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 CALM3P0DP25 149 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 FPGSQ05932 587 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 NFXL1Q6ZNB6 911 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 SPZ1Q9BXG8 430 aa21.1■□□□□ 0.97
VCX3A-203ENST00000612369 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
VCX3A-203ENST00000612369 NR3C2P08235 984 aa21.09■□□□□ 0.97
VCX3A-203ENST00000612369 PURAQ00577 322 aaKnown RBP21.09■□□□□ 0.97
VCX3A-203ENST00000612369 SHHQ15465 462 aa21.09■□□□□ 0.97
VCX3A-203ENST00000612369 MFSD5Q6N075 450 aa21.09■□□□□ 0.97
VCX3A-203ENST00000612369 CCDC62Q6P9F0 684 aa21.09■□□□□ 0.97
VCX3A-203ENST00000612369 BAZ2BQ9UIF8 2168 aaKnown RBP21.09■□□□□ 0.97
VCX3A-203ENST00000612369 GRIN2DO15399 1336 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 GCOM1H8Y6P7 765 aaPredicted RBP21.08■□□□□ 0.97
VCX3A-203ENST00000612369 POLR2MP0CAP2 368 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 EIF2AK2P19525 551 aaKnown RBP21.08■□□□□ 0.97
VCX3A-203ENST00000612369 TSGA10IPQ3SY00 556 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
VCX3A-203ENST00000612369 PDCD2LQ9BRP1 358 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 MTG1Q9BT17 334 aaPredicted RBP21.08■□□□□ 0.97
VCX3A-203ENST00000612369 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.97
VCX3A-203ENST00000612369 ARIH2O95376 493 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 GH1P01241 217 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 MYL3P08590 195 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 KRT32Q14532 448 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 C9orf50Q5SZB4 431 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 SGMS1Q86VZ5 419 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 TMEM199Q8N511 208 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 COPS5Q92905 334 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 NEK1Q96PY6 1258 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
VCX3A-203ENST00000612369 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
VCX3A-203ENST00000612369 NEFLP07196 543 aa21.06■□□□□ 0.96
VCX3A-203ENST00000612369 PSMC6P62333 389 aa21.06■□□□□ 0.96
VCX3A-203ENST00000612369 PPIGQ13427 754 aaKnown RBP eCLIP21.06■□□□□ 0.96
VCX3A-203ENST00000612369 KCNV1Q6PIU1 500 aa21.06■□□□□ 0.96
VCX3A-203ENST00000612369 VSIG10LQ86VR7 867 aa21.06■□□□□ 0.96
VCX3A-203ENST00000612369 SEC63Q9UGP8 760 aaKnown RBP21.06■□□□□ 0.96
VCX3A-203ENST00000612369 SUPT20HL2P0C7V6 817 aa21.05■□□□□ 0.96
VCX3A-203ENST00000612369 HOXA13P31271 388 aaPredicted RBP21.05■□□□□ 0.96
VCX3A-203ENST00000612369 LY6KQ17RY6 165 aa21.05■□□□□ 0.96
VCX3A-203ENST00000612369 FAM109BQ6ICB4 259 aaPredicted RBP21.05■□□□□ 0.96
VCX3A-203ENST00000612369 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
VCX3A-203ENST00000612369 ALDH8A1Q9H2A2 487 aaPredicted RBP21.05■□□□□ 0.96
VCX3A-203ENST00000612369 DDX41Q9UJV9 622 aaKnown RBP21.05■□□□□ 0.96
VCX3A-203ENST00000612369 EPHB4P54760 987 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 PTPN11Q06124 597 aaPredicted RBP21.04■□□□□ 0.96
VCX3A-203ENST00000612369 ARHGAP1Q07960 439 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 COL9A3Q14050 684 aaPredicted RBP21.04■□□□□ 0.96
VCX3A-203ENST00000612369 PGM5Q15124 567 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 NFRKBQ6P4R8 1299 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 DHX32Q7L7V1 743 aaKnown RBP21.04■□□□□ 0.96
VCX3A-203ENST00000612369 SRBD1Q8N5C6 995 aaKnown RBP21.04■□□□□ 0.96
VCX3A-203ENST00000612369 DEFB123Q8N688 67 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 EMID1Q96A84 441 aaPredicted RBP21.04■□□□□ 0.96
VCX3A-203ENST00000612369 MRVI1Q9Y6F6 885 aa21.04■□□□□ 0.96
VCX3A-203ENST00000612369 SCN10AQ9Y5Y9 1956 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms