RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	BAZ2B	Q9UIF8	2168 aa	Known RBP	24.7	■■□□□ 1.54
NECAB3-222	ENST00000607805	ARIH2	O95376	493 aa		24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	ATP2A2	P16615	1042 aa	Known RBP	24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	IGFBP4	P22692	258 aa		24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	PPP2R5B	Q15173	497 aa		24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	CCDC85B	Q15834	202 aa	Predicted RBP	24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	CRBN	Q96SW2	442 aa		24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	ZBTB47	Q9UFB7	747 aa	Predicted RBP	24.69	■■□□□ 1.54
NECAB3-222	ENST00000607805	PITPNM1	O00562	1244 aa		24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	KPNA6	O60684	536 aa		24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	PTPN11	Q06124	597 aa	Predicted RBP	24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	GPATCH4	Q5T3I0	446 aa	Known RBP	24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	PPP2R2D	Q66LE6	453 aa		24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	CCDC62	Q6P9F0	684 aa		24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	MAF1	Q9H063	256 aa		24.68	■■□□□ 1.54
NECAB3-222	ENST00000607805	NEDD4	P46934	1319 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	ZBBX	A8MT70	800 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	POU3F3	P20264	500 aa	Predicted RBP	24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	RFC2	P35250	354 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	MRPS5	P82675	430 aa	Known RBP	24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	BRDT	Q58F21	947 aa	Predicted RBP	24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	DEFB128	Q7Z7B8	93 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	DGKH	Q86XP1	1220 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	PPP1R13L	Q8WUF5	828 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	CTAGE1	Q96RT6	745 aa		24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	GPHN	Q9NQX3	736 aa	Predicted RBP	24.67	■■□□□ 1.54
NECAB3-222	ENST00000607805	RAD50	Q92878	1312 aa		24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	IQCF3	P0C7M6	154 aa		24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	TXN	P10599	105 aa	Known RBP	24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	ANKS1A	Q92625	1134 aa		24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	MPHOSPH6	Q99547	160 aa	Known RBP	24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	CPVL	Q9H3G5	476 aa		24.66	■■□□□ 1.54
NECAB3-222	ENST00000607805	GOLGA8H	P0CJ92	632 aa		24.65	■■□□□ 1.54
NECAB3-222	ENST00000607805	ADAMTS19	Q8TE59	1207 aa		24.65	■■□□□ 1.54
NECAB3-222	ENST00000607805	TBC1D5	Q92609	795 aa		24.65	■■□□□ 1.54
NECAB3-222	ENST00000607805	RNF41	Q9H4P4	317 aa	Predicted RBP	24.65	■■□□□ 1.54
NECAB3-222	ENST00000607805	NT5C2	P49902	561 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	USH1G	Q495M9	461 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	FAM47C	Q5HY64	1035 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	TMEM67	Q5HYA8	995 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	PHOSPHO2	Q8TCD6	241 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	ESR2	Q92731	530 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	SLC9A7	Q96T83	725 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	ZKSCAN3	Q9BRR0	538 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	UBA5	Q9GZZ9	404 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	COL20A1	Q9P218	1284 aa		24.64	■■□□□ 1.54
NECAB3-222	ENST00000607805	COL4A4	P53420	1690 aa	Predicted RBP	24.64	■■□□□ 1.53
NECAB3-222	ENST00000607805		B4DLN1	442 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	CA3	P07451	260 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	SDS	P20132	328 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	MRPL12	P52815	198 aa	Known RBP	24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	SMC5	Q8IY18	1101 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	PNMA1	Q8ND90	353 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	SYTL5	Q8TDW5	730 aa	Predicted RBP	24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	LNPK	Q9C0E8	428 aa		24.63	■■□□□ 1.53
NECAB3-222	ENST00000607805	TRIM6-TRIM34	B2RNG4	842 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	ACTN1	P12814	892 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	ARHGAP1	Q07960	439 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	GPNMB	Q14956	572 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	CDC37	Q16543	378 aa	Predicted RBP	24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	SESTD1	Q86VW0	696 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	KAT2B	Q92831	832 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	TAAR1	Q96RJ0	339 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	OSBPL3	Q9H4L5	887 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	MTCH2	Q9Y6C9	303 aa		24.62	■■□□□ 1.53
NECAB3-222	ENST00000607805	ABCB11	O95342	1321 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	SI	P14410	1827 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	MICAL3	Q7RTP6	2002 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	EPOP	A6NHQ4	379 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	ARHGEF15	O94989	841 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	MFAP1	P55081	439 aa	Known RBP	24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	BFSP2	Q13515	415 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	ADGRF4	Q8IZF3	695 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	RILPL2	Q969X0	211 aa		24.61	■■□□□ 1.53
NECAB3-222	ENST00000607805	RFXAP	O00287	272 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	ZNF213	O14771	459 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	KDM4A	O75164	1064 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	MMP3	P08254	477 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	BMP1	P13497	986 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	TAP1	Q03518	808 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	CCDC178	Q5BJE1	867 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	PLEKHM2	Q8IWE5	1019 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	RETREG2	Q8NC44	543 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	NSUN6	Q8TEA1	469 aa	Known RBP	24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	AFG1L	Q8WV93	481 aa		24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	UHRF1	Q96T88	793 aa	Predicted RBP	24.6	■■□□□ 1.53
NECAB3-222	ENST00000607805	RBL2	Q08999	1139 aa		24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	PTGIS	Q16647	500 aa		24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	LY6K	Q17RY6	165 aa		24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	GDF6	Q6KF10	455 aa	Predicted RBP	24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	HERC6	Q8IVU3	1022 aa		24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	ENAH	Q8N8S7	591 aa	Predicted RBP	24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	IWS1	Q96ST2	819 aa		24.59	■■□□□ 1.53
NECAB3-222	ENST00000607805	DOCK5	Q9H7D0	1870 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	BAIAP3	O94812	1187 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	GH1	P01241	217 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	QRICH1	Q2TAL8	776 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	ASPRV1	Q53RT3	343 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	IQCA1	Q86XH1	822 aa		24.58	■■□□□ 1.53
NECAB3-222	ENST00000607805	CAGE1	Q8TC20	777 aa		24.58	■■□□□ 1.53

Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms