RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 RARBP10826 455 aa23.13■■□□□ 1.29
SSBP4-210ENST00000601444 IRX5P78411 483 aaPredicted RBP23.13■■□□□ 1.29
SSBP4-210ENST00000601444 PKN1Q16512 942 aa23.13■■□□□ 1.29
SSBP4-210ENST00000601444 GJC2Q5T442 439 aaPredicted RBP23.13■■□□□ 1.29
SSBP4-210ENST00000601444 LOC102724159A0A0B4J2E5 919 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 LRRC37A2A6NM11 1700 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 STXBP3O00186 592 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 PRPF3O43395 683 aaKnown RBP23.12■■□□□ 1.29
SSBP4-210ENST00000601444 LARGE1O95461 756 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 IFNAR1P17181 557 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 SCRN1Q12765 414 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 PWP2Q15269 919 aaKnown RBP23.12■■□□□ 1.29
SSBP4-210ENST00000601444 PFKFB3Q16875 520 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-210ENST00000601444 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 ANKLE1Q8NAG6 615 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 SLC26A6Q9BXS9 759 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 PSTPIP2Q9H939 334 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 VTA1Q9NP79 307 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 XPNPEP3Q9NQH7 507 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
SSBP4-210ENST00000601444 TNRC18O15417 2968 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-210ENST00000601444 SMPD1P17405 629 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 NAPAP54920 295 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 ANKRD1Q15327 319 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 UBE2SQ16763 222 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 IL31RAQ8NI17 732 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 ZFP91Q96JP5 570 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-210ENST00000601444 BARHL2Q9NY43 387 aa23.11■■□□□ 1.29
SSBP4-210ENST00000601444 PIK3CDO00329 1044 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 PFKFB2O60825 505 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 NR3C2P08235 984 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 SCG2P13521 617 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 CAPN2P17655 700 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 TNFAIP2Q03169 654 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 LRRC41Q15345 812 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 ME3Q16798 604 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 NECAB1Q8N987 351 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 SMARCC2Q8TAQ2 1214 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 IWS1Q96ST2 819 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 MPHOSPH6Q99547 160 aaKnown RBP23.1■■□□□ 1.29
SSBP4-210ENST00000601444 PDCD2LQ9BRP1 358 aa23.1■■□□□ 1.29
SSBP4-210ENST00000601444 SLKQ9H2G2 1235 aaPredicted RBP23.1■■□□□ 1.29
SSBP4-210ENST00000601444 SYNRGQ9UMZ2 1314 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 MYADML2A6NDP7 307 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 B4DLN1 442 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 DUSP11O75319 330 aaKnown RBP23.09■■□□□ 1.29
SSBP4-210ENST00000601444 MYCLP12524 364 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-210ENST00000601444 MRPL12P52815 198 aaKnown RBP23.09■■□□□ 1.29
SSBP4-210ENST00000601444 PGM5Q15124 567 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 STXBP2Q15833 593 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 NECAB2Q7Z6G3 386 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 ARRDC4Q8NCT1 418 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 CUL5Q93034 780 aa23.09■■□□□ 1.29
SSBP4-210ENST00000601444 RNF26Q9BY78 433 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-210ENST00000601444 GNEQ9Y223 722 aaKnown RBP23.09■■□□□ 1.29
SSBP4-210ENST00000601444 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
SSBP4-210ENST00000601444 CPLX1O14810 134 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 ADAMTS3O15072 1205 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 ADAMTS4O75173 837 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 AKAP17AQ02040 695 aaKnown RBP23.08■■□□□ 1.29
SSBP4-210ENST00000601444 IQSEC1Q6DN90 963 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 SEPT14Q6ZU15 432 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 BACH2Q9BYV9 841 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 WDR11Q9BZH6 1224 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 C11orf49Q9H6J7 331 aa23.08■■□□□ 1.29
SSBP4-210ENST00000601444 SMCO2A6NFE2 343 aa23.07■■□□□ 1.28
SSBP4-210ENST00000601444 DNM1LO00429 736 aa23.07■■□□□ 1.28
SSBP4-210ENST00000601444 COL6A1P12109 1028 aa23.07■■□□□ 1.28
SSBP4-210ENST00000601444 SSRP1Q08945 709 aaKnown RBP23.07■■□□□ 1.28
SSBP4-210ENST00000601444 VSIG10LQ86VR7 867 aa23.07■■□□□ 1.28
SSBP4-210ENST00000601444 UPF2Q9HAU5 1272 aaKnown RBP23.07■■□□□ 1.28
SSBP4-210ENST00000601444 RIC8AQ9NPQ8 531 aa23.07■■□□□ 1.28
SSBP4-210ENST00000601444 hCG_1984214I3L0E3 225 aa23.06■■□□□ 1.28
SSBP4-210ENST00000601444 ARIH2O95376 493 aa23.06■■□□□ 1.28
SSBP4-210ENST00000601444 CTDNEP1O95476 244 aa23.06■■□□□ 1.28
SSBP4-210ENST00000601444 PPP1R18Q6NYC8 613 aa23.06■■□□□ 1.28
SSBP4-210ENST00000601444 ZNF713Q8N859 430 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-210ENST00000601444 COPS5Q92905 334 aa23.06■■□□□ 1.28
SSBP4-210ENST00000601444 SENP6Q9GZR1 1112 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-210ENST00000601444 CTAGE5O15320 804 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 DYNC1LI2O43237 492 aaPredicted RBP23.05■■□□□ 1.28
SSBP4-210ENST00000601444 EIF3JO75822 258 aaKnown RBP23.05■■□□□ 1.28
SSBP4-210ENST00000601444 RGS20O76081 388 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 GJA9P57773 515 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 MRPS9P82933 396 aaKnown RBP23.05■■□□□ 1.28
SSBP4-210ENST00000601444 DUSP28Q4G0W2 176 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 RNF180Q86T96 592 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 KLHDC9Q8NEP7 349 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 FERMT2Q96AC1 680 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 TBC1D32Q96NH3 1257 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 AIFM3Q96NN9 605 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 UPF3AQ9H1J1 476 aaKnown RBP23.05■■□□□ 1.28
SSBP4-210ENST00000601444 TMEM260Q9NX78 707 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 VPS54Q9P1Q0 977 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 RBM27Q9P2N5 1060 aaKnown RBP23.05■■□□□ 1.28
SSBP4-210ENST00000601444 PCDHA6Q9UN73 950 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 PCDHA8Q9Y5H6 950 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 FRMPD4Q14CM0 1322 aa23.05■■□□□ 1.28
SSBP4-210ENST00000601444 KBTBD13C9JR72 458 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 C6orf222P0C671 652 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms