RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 LIMCH1Q9UPQ0 1083 aa15.9■□□□□ 0.14
SNRPA-208ENST00000600456 CENPFP49454 3210 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 STXBP3O00186 592 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 MEIS2O14770 477 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 ST18O60284 1047 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 TFRCP02786 760 aaKnown RBP15.89■□□□□ 0.13
SNRPA-208ENST00000600456 EN2P19622 333 aaPredicted RBP15.89■□□□□ 0.13
SNRPA-208ENST00000600456 HOXA13P31271 388 aaPredicted RBP15.89■□□□□ 0.13
SNRPA-208ENST00000600456 RGS19P49795 217 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 SSRP1Q08945 709 aaKnown RBP15.89■□□□□ 0.13
SNRPA-208ENST00000600456 PKN1Q16512 942 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 ARHGEF16Q5VV41 709 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 FAM177A1Q8N128 213 aaPredicted RBP15.89■□□□□ 0.13
SNRPA-208ENST00000600456 SMARCC2Q8TAQ2 1214 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 SHISA4Q96DD7 197 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
SNRPA-208ENST00000600456 LCTP09848 1927 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 ESYT2A0FGR8 921 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 DEXIO95424 95 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 RARBP10826 455 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 ADCY7P51828 1080 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 ME3Q16798 604 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 TYW1BQ6NUM6 668 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 ZSCAN31Q96LW9 406 aaPredicted RBP15.88■□□□□ 0.13
SNRPA-208ENST00000600456 RIC8AQ9NPQ8 531 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 SH3GLB2Q9NR46 395 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 KIAA0100Q14667 2235 aaKnown RBP15.88■□□□□ 0.13
SNRPA-208ENST00000600456 FRMPD4Q14CM0 1322 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 STK36Q9NRP7 1315 aa15.88■□□□□ 0.13
SNRPA-208ENST00000600456 EIF2AK2P19525 551 aaKnown RBP15.87■□□□□ 0.13
SNRPA-208ENST00000600456 STXBP2Q15833 593 aa15.87■□□□□ 0.13
SNRPA-208ENST00000600456 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
SNRPA-208ENST00000600456 USP17L6PQ6QN14 398 aa15.87■□□□□ 0.13
SNRPA-208ENST00000600456 NOL8Q76FK4 1167 aaKnown RBP15.87■□□□□ 0.13
SNRPA-208ENST00000600456 FBXO16Q8IX29 292 aaPredicted RBP15.87■□□□□ 0.13
SNRPA-208ENST00000600456 CCDC148Q8NFR7 591 aa15.87■□□□□ 0.13
SNRPA-208ENST00000600456 PDCD2LQ9BRP1 358 aa15.87■□□□□ 0.13
SNRPA-208ENST00000600456 RBM47A0AV96 593 aaKnown RBP15.86■□□□□ 0.13
SNRPA-208ENST00000600456 SMCO2A6NFE2 343 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 DUSP11O75319 330 aaKnown RBP15.86■□□□□ 0.13
SNRPA-208ENST00000600456 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
SNRPA-208ENST00000600456 LARGE1O95461 756 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 NR3C2P08235 984 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 MCTP2Q6DN12 878 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 IQSEC1Q6DN90 963 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 TAPT1Q6NXT6 567 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 XRRA1Q6P2D8 792 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 NECAB1Q8N987 351 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 ARRDC4Q8NCT1 418 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 ZMYND12Q9H0C1 365 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 XPNPEP3Q9NQH7 507 aa15.86■□□□□ 0.13
SNRPA-208ENST00000600456 SH2B1Q9NRF2 756 aaPredicted RBP15.86■□□□□ 0.13
SNRPA-208ENST00000600456 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
SNRPA-208ENST00000600456 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 SPDYE3A6NKU9 549 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 STAM2O75886 525 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 FARP2O94887 1054 aaPredicted RBP15.85■□□□□ 0.13
SNRPA-208ENST00000600456 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
SNRPA-208ENST00000600456 GNA11P29992 359 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 CCND2P30279 289 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 MCM2P49736 904 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 TNFAIP2Q03169 654 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 PGM5Q15124 567 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 EEPD1Q7L9B9 569 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 VSIG10LQ86VR7 867 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 SCFD2Q8WU76 684 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 WASF1Q92558 559 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 C6orf50Q9HD87 102 aa15.85■□□□□ 0.13
SNRPA-208ENST00000600456 DNM1LO00429 736 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 PPFIA3O75145 1194 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 CTDNEP1O95476 244 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 AP3B2Q13367 1082 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 UBE2SQ16763 222 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 UBE2Q1Q7Z7E8 422 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 BICD2Q8TD16 824 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
SNRPA-208ENST00000600456 WDR11Q9BZH6 1224 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 SPC25Q9HBM1 224 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 PDGFCQ9NRA1 345 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 Q9Y3F1 56 aa15.84■□□□□ 0.13
SNRPA-208ENST00000600456 NKRFO15226 690 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNRPA-208ENST00000600456 MYCLP12524 364 aaPredicted RBP15.83■□□□□ 0.12
SNRPA-208ENST00000600456 XBP1P17861 261 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 NKX3-2P78367 333 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 TTLL4Q14679 1199 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 DUSP28Q4G0W2 176 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 ANO1Q5XXA6 986 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 PCNX4Q63HM2 1172 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 GALNT17Q6IS24 598 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 KCNV1Q6PIU1 500 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 RNF180Q86T96 592 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 NSUN7Q8NE18 718 aaKnown RBP15.83■□□□□ 0.12
SNRPA-208ENST00000600456 UPF3AQ9H1J1 476 aaKnown RBP15.83■□□□□ 0.12
SNRPA-208ENST00000600456 VPS54Q9P1Q0 977 aa15.83■□□□□ 0.12
SNRPA-208ENST00000600456 ORC3Q9UBD5 711 aaPredicted RBP15.83■□□□□ 0.12
SNRPA-208ENST00000600456 PCDHA6Q9UN73 950 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms