RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 MRPL12P52815 198 aaKnown RBP25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 CMTR1Q8N1G2 835 aaKnown RBP25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 PIBF1Q8WXW3 757 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 GLT1D1Q96MS3 346 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 AP5M1Q9H0R1 490 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 MAP3K20Q9NYL2 800 aaKnown RBP25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 SLC12A7Q9Y666 1083 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 A0A1W2PPC1 479 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 TRIM43BA6NCK2 446 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 CALM1P0DP23 149 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 CALM2P0DP24 149 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 CALM3P0DP25 149 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 KRT32Q14532 448 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 ANKRD33Q7Z3H0 272 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 TRIM43Q96BQ3 446 aaPredicted RBP25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 IWS1Q96ST2 819 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 LZTS2Q9BRK4 669 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 PXMP2Q9NR77 195 aa25.86■■□□□ 1.73
GTF2F1-204ENST00000594965 PQBP1O60828 265 aaKnown RBP25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 ARIH2O95376 493 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 EIF2AK2P19525 551 aaKnown RBP25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 HOXA13P31271 388 aaPredicted RBP25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 GNAQP50148 359 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 CDK7P50613 346 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 TRAF1Q13077 416 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 SAMD3Q8N6K7 520 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 FANCBQ8NB91 859 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 SCFD2Q8WU76 684 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 COPS5Q92905 334 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 TOX2Q96NM4 488 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 PRDM5Q9NQX1 630 aaPredicted RBP25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 BRPF3Q9ULD4 1205 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 SNX14Q9Y5W7 946 aa25.85■■□□□ 1.73
GTF2F1-204ENST00000594965 ARHGEF16Q5VV41 709 aa25.84■■□□□ 1.73
GTF2F1-204ENST00000594965 APOA5Q6Q788 366 aa25.84■■□□□ 1.73
GTF2F1-204ENST00000594965 CXCL17Q6UXB2 119 aa25.84■■□□□ 1.73
GTF2F1-204ENST00000594965 PRKAG2Q9UGJ0 569 aa25.84■■□□□ 1.73
GTF2F1-204ENST00000594965 A0A0U1RQG5 324 aaPredicted RBP25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 CLTBP09497 229 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 CPA1P15085 419 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 ITGB8P26012 769 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 FAAP100Q0VG06 881 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 PPP2R5BQ15173 497 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 STXBP2Q15833 593 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 CCDC62Q6P9F0 684 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 MICU3Q86XE3 530 aa25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 RRP36Q96EU6 259 aaKnown RBP25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 UBE2OQ9C0C9 1292 aaKnown RBP25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 RANBP2P49792 3224 aaKnown RBP25.83■■□□□ 1.73
GTF2F1-204ENST00000594965 GCOM1H8Y6P7 765 aaPredicted RBP25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 ARVCFO00192 962 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 NKRFO15226 690 aaKnown RBP eCLIP25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 REC8O95072 547 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 NR3C2P08235 984 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 POLR2MP0CAP2 368 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 TXNP10599 105 aaKnown RBP25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 SEPT14Q6ZU15 432 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 TMTC3Q6ZXV5 915 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 OR6J1Q8NGC5 347 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 VTI1AQ96AJ9 217 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 PDCD2LQ9BRP1 358 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 GRIN2DO15399 1336 aa25.82■■□□□ 1.72
GTF2F1-204ENST00000594965 HMGB1P09429 215 aaKnown RBP25.81■■□□□ 1.72
GTF2F1-204ENST00000594965 TTLL4Q14679 1199 aa25.81■■□□□ 1.72
GTF2F1-204ENST00000594965 SLC43A3Q8NBI5 491 aa25.81■■□□□ 1.72
GTF2F1-204ENST00000594965 JAKMIP1Q96N16 626 aaKnown RBP25.81■■□□□ 1.72
GTF2F1-204ENST00000594965 SCN10AQ9Y5Y9 1956 aa25.81■■□□□ 1.72
GTF2F1-204ENST00000594965 KIAA0355O15063 1070 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 ZEB2O60315 1214 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 CABYRO75952 493 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 PGM5Q15124 567 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 CCDC82Q8N4S0 544 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 IL31RAQ8NI17 732 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 BADQ92934 168 aa25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 LBHD1Q9BQE6 289 aaPredicted RBP25.8■■□□□ 1.72
GTF2F1-204ENST00000594965 hCG_1642624A0A1W2PR95 340 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 EIF3JO75822 258 aaKnown RBP25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 RGS20O76081 388 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 SYNE3Q6ZMZ3 975 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 FCHSD1Q86WN1 690 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 FAM126BQ8IXS8 530 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 TDHQ8IZJ6 230 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 SEC63Q9UGP8 760 aaKnown RBP25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 MROH7Q68CQ1 1323 aa25.79■■□□□ 1.72
GTF2F1-204ENST00000594965 DCDC2CA8MYV0 355 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 SOX1O00570 391 aaPredicted RBP25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 ZBTB43O43298 467 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 EPB41L2O43491 1005 aaKnown RBP25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 MYCLP12524 364 aaPredicted RBP25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 CPT1AP50416 773 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 PSMC6P62333 389 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 PURAQ00577 322 aaKnown RBP25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 FUT2Q10981 343 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 ITGA7Q13683 1181 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 VSIG10LQ86VR7 867 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 FAM217BQ9NTX9 383 aaPredicted RBP25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 TMEM39AQ9NV64 488 aa25.78■■□□□ 1.72
GTF2F1-204ENST00000594965 DDX41Q9UJV9 622 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms