RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
SDF2-208ENST00000589788 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
SDF2-208ENST00000589788 CPVLQ9H3G5 476 aa12.08□□□□□ -0.48
SDF2-208ENST00000589788 PFASO15067 1338 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 MSCO60682 206 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 CYBAP13498 195 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 KRT32Q14532 448 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
SDF2-208ENST00000589788 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
SDF2-208ENST00000589788 IGDCC4Q8TDY8 1250 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 VAT1LQ9HCJ6 419 aa12.07□□□□□ -0.48
SDF2-208ENST00000589788 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
SDF2-208ENST00000589788 MYH6P13533 1939 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 CCDC69A6NI79 296 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 IGHA2P01877 340 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 TAL1P17542 331 aaPredicted RBP12.06□□□□□ -0.48
SDF2-208ENST00000589788 GRM4Q14833 912 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 PRAMEF19Q5SWL8 479 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 STAG2Q8N3U4 1231 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 NEK1Q96PY6 1258 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 LY9Q9HBG7 655 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
SDF2-208ENST00000589788 NRBP1Q9UHY1 535 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
SDF2-208ENST00000589788 PTPDC1A2A3K4 754 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
SDF2-208ENST00000589788 AP1G2O75843 785 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 TSGA10IPQ3SY00 556 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 USH1GQ495M9 461 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 TRPV1Q8NER1 839 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
SDF2-208ENST00000589788 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 CYP39A1Q9NYL5 469 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 OGDHLQ9ULD0 1010 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 PDE4DIPQ5VU43 2346 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
SDF2-208ENST00000589788 FRMPD3Q5JV73 1810 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 MCM3APO60318 1980 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 NFIBO00712 420 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
SDF2-208ENST00000589788 SEPT4O43236 478 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 DDAH1O94760 285 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
SDF2-208ENST00000589788 CALM1P0DP23 149 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 CALM2P0DP24 149 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 CALM3P0DP25 149 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 KIF5BP33176 963 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 LIFRP42702 1097 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 CNTN2Q02246 1040 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 TROAPQ12815 778 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
SDF2-208ENST00000589788 QRICH1Q2TAL8 776 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 MAMDC4Q6UXC1 1216 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
SDF2-208ENST00000589788 NECAB2Q7Z6G3 386 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 ABCB11O95342 1321 aa12.04□□□□□ -0.48
SDF2-208ENST00000589788 ASB14A6NK59 587 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 HSPA4P34932 840 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 FGD1P98174 961 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 RNF207Q6ZRF8 634 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 ARMCX2Q7L311 632 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 HOMER1Q86YM7 354 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 CLEC4DQ8WXI8 215 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 MAP3K14Q99558 947 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 MRPL11Q9Y3B7 192 aaKnown RBP12.03□□□□□ -0.48
SDF2-208ENST00000589788 CENPFP49454 3210 aa12.03□□□□□ -0.48
SDF2-208ENST00000589788 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 CFAP99D6REC4 459 aa12.02□□□□□ -0.49
SDF2-208ENST00000589788 ZBTB5O15062 677 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms