RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
GGA3-219ENST00000584550 HAUS7Q99871 368 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
GGA3-219ENST00000584550 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 APPP05067 770 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 ATP5JP18859 108 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 ERVK-21P61565 698 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
GGA3-219ENST00000584550 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 RAD9AQ99638 391 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 C17orf80Q9BSJ5 609 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
GGA3-219ENST00000584550 SIP14410 1827 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 GJB5O95377 273 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 TDO2P48775 406 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
GGA3-219ENST00000584550 TFAP4Q01664 338 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 BRDTQ58F21 947 aaPredicted RBP12.07□□□□□ -0.48
GGA3-219ENST00000584550 ZSCAN25Q6NSZ9 544 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 MORC4Q8TE76 937 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
GGA3-219ENST00000584550 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 NBNO60934 754 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 CALML3P27482 149 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
GGA3-219ENST00000584550 CNKSR3Q6P9H4 555 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 LRRC8DQ7L1W4 858 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 NEDD1Q8NHV4 660 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
GGA3-219ENST00000584550 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
GGA3-219ENST00000584550 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
GGA3-219ENST00000584550 RBM47A0AV96 593 aaKnown RBP12.05□□□□□ -0.48
GGA3-219ENST00000584550 A6NJR5 290 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 NFIBO00712 420 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 KPNA6O60684 536 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 TXNP10599 105 aaKnown RBP12.05□□□□□ -0.48
GGA3-219ENST00000584550 SELPP16109 830 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 SLC16A2P36021 539 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 PTPN11Q06124 597 aaPredicted RBP12.05□□□□□ -0.48
GGA3-219ENST00000584550 PDE4DQ08499 809 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
GGA3-219ENST00000584550 PUS10Q3MIT2 529 aaKnown RBP12.05□□□□□ -0.48
GGA3-219ENST00000584550 RCSD1Q6JBY9 416 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.05□□□□□ -0.48
GGA3-219ENST00000584550 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 NEK9Q8TD19 979 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 AFAP1L1Q8TED9 768 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 OSBP2Q969R2 916 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 KCNH6Q9H252 994 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 STX8Q9UNK0 236 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 RAD50Q92878 1312 aa12.05□□□□□ -0.48
GGA3-219ENST00000584550 NMT2O60551 498 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 ICAM1P05362 532 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 CKBP12277 381 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 ZP2Q05996 745 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 PDE4BQ07343 736 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 IKBKEQ14164 716 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 TTBK2Q6IQ55 1244 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 GIMAP6Q6P9H5 292 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
GGA3-219ENST00000584550 MRPL38Q96DV4 380 aaKnown RBP12.04□□□□□ -0.48
GGA3-219ENST00000584550 INCENPQ9NQS7 918 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 MUTYHQ9UIF7 546 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 CFAP54Q96N23 3096 aa12.04□□□□□ -0.48
GGA3-219ENST00000584550 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 M0R2C6 588 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 GPAA1O43292 621 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 ARIH2O95376 493 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 MX1P20591 662 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 IRS1P35568 1242 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 CLUL1Q15846 466 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 TCEAL5Q5H9L2 206 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 IER5LQ5T953 404 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 MFSD14AQ96MC6 490 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 CLDND1Q9NY35 253 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 INSL6Q9Y581 213 aa12.03□□□□□ -0.48
GGA3-219ENST00000584550 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms