RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 TNMDQ9H2S6 317 aa20.34■□□□□ 0.85
EIF4A1-216ENST00000580888 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
EIF4A1-216ENST00000580888 SYNPO2Q9UMS6 1093 aa20.34■□□□□ 0.85
EIF4A1-216ENST00000580888 TMX2Q9Y320 296 aa20.34■□□□□ 0.85
EIF4A1-216ENST00000580888 COL11A1P12107 1806 aaPredicted RBP20.34■□□□□ 0.85
EIF4A1-216ENST00000580888 hCG_1984214I3L0E3 225 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 MAP2K5Q13163 448 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 UVSSAQ2YD98 709 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 TYW1BQ6NUM6 668 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 ZNF713Q8N859 430 aaPredicted RBP20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 ZNF579Q8NAF0 562 aaKnown RBP20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 MTMR8Q96EF0 704 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 PANK2Q9BZ23 570 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 SH2D4AQ9H788 454 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 ARHGEF10LQ9HCE6 1279 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 HOXC10Q9NYD6 342 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 PCDHA4Q9UN74 947 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 CEP131Q9UPN4 1083 aa20.33■□□□□ 0.85
EIF4A1-216ENST00000580888 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 BMP15O95972 392 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 HOXC6P09630 235 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 PRKAR2AP13861 404 aaKnown RBP20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 NLRP5P59047 1200 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 COG2Q14746 738 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 RESP18Q5W5W9 173 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 RASGRP2Q7LDG7 609 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 BLIDQ8IZY5 108 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 CCDC148Q8NFR7 591 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 TIGD1Q96MW7 591 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 PCDH10Q9P2E7 1040 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 FBXO2Q9UK22 296 aaPredicted RBP20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 OGDHLQ9ULD0 1010 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 COLQQ9Y215 455 aaPredicted RBP20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 PCDHB6Q9Y5E3 794 aa20.32■□□□□ 0.84
EIF4A1-216ENST00000580888 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 ESYT2A0FGR8 921 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 MARCKSP29966 332 aaPredicted RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 NDUFA8P51970 172 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 ICA1Q05084 483 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 GRB14Q14449 540 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 GPATCH4Q5T3I0 446 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 SHC4Q6S5L8 630 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 NECAB2Q7Z6G3 386 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 ZMYND12Q9H0C1 365 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 VCPKMTQ9H867 229 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 NOL7Q9UMY1 257 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 SRPRBQ9Y5M8 271 aaKnown RBP20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 NR2E3Q9Y5X4 410 aa20.31■□□□□ 0.84
EIF4A1-216ENST00000580888 A0A1B0GVL5 298 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 FAM205CA6NFA0 338 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 ADAMTS3O15072 1205 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 CCDC192P0DO97 292 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 MNX1P50219 401 aaPredicted RBP20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 CACNB2Q08289 660 aaPredicted RBP20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 ELOA2Q8IYF1 753 aaPredicted RBP20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 MB21D1Q8N884 522 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 SHCBP1Q8NEM2 672 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 DCAF4Q8WV16 495 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 PPP1R9BQ96SB3 815 aa20.3■□□□□ 0.84
EIF4A1-216ENST00000580888 WDR46O15213 610 aaKnown RBP20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 KINO60870 393 aaKnown RBP20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 IGHA2P01877 340 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 EEF2P13639 858 aaKnown RBP20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 PFKFB1P16118 471 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 DSG3P32926 999 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 CAMK4Q16566 473 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 CCL14Q16627 93 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 GPKOWQ92917 476 aaPredicted RBP eCLIP20.29■□□□□ 0.848e-6■■■□□ 18.6
EIF4A1-216ENST00000580888 TANGO6Q9C0B7 1094 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 PRO3102Q9H379 93 aa20.29■□□□□ 0.84
EIF4A1-216ENST00000580888 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 TYRO3Q06418 890 aa20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 DIS3LQ8TF46 1054 aaKnown RBP20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 PIGSQ96S52 555 aa20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 MOV10L1Q9BXT6 1211 aaKnown RBP20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 CPVLQ9H3G5 476 aa20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 MRVI1Q9Y6F6 885 aa20.28■□□□□ 0.84
EIF4A1-216ENST00000580888 STRNO43815 780 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 ZNF202O95125 648 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 FXR1P51114 621 aaKnown RBP eCLIP20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 TTC38Q5R3I4 469 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 SPATC1LQ9H0A9 340 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 PCDHA6Q9UN73 950 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 ADAMTS5Q9UNA0 930 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 PCDHA8Q9Y5H6 950 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 IVNS1ABPQ9Y6Y0 642 aa20.27■□□□□ 0.84
EIF4A1-216ENST00000580888 PLXNA1Q9UIW2 1896 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms