RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CDK7P50613 346 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 CHMP4BP1P59074 171 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 NKX3-2P78367 333 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TTLL4Q14679 1199 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 CATIPQ7Z7H3 387 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
NPLOC4-216ENST00000574344 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 ZBTB5O15062 677 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 EDNRBP24530 442 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 CYP2C18P33260 490 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 EPHB4P54760 987 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 GRM4Q14833 912 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 STXBP2Q15833 593 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 C8orf34Q49A92 452 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 STOX1Q6ZVD7 989 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 PIBF1Q8WXW3 757 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 COPS5Q92905 334 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 MAP4K1Q92918 833 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 HIPK3Q9H422 1215 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.61
NPLOC4-216ENST00000574344 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 B4GALT4O60513 344 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 CD4P01730 458 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 ACRP10323 421 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 CSF2RAP15509 400 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 PURAQ00577 322 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 TRAF1Q13077 416 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 PSRC1Q6PGN9 363 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 SKAP1Q86WV1 359 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 PIGSQ96S52 555 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.621e-15■□□□□ 10.6
NPLOC4-216ENST00000574344 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 MAF1Q9H063 256 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 COL20A1Q9P218 1284 aa11.2□□□□□ -0.62
NPLOC4-216ENST00000574344 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 PRC1O43663 620 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 ARIH2O95376 493 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 GH1P01241 217 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 MYCLP12524 364 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 CCL23P55773 120 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 ANTXR2P58335 489 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 FAM109BQ6ICB4 259 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 PXMP2Q9NR77 195 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 STXBP5LQ9Y2K9 1186 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
NPLOC4-216ENST00000574344 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 KPNA6O60684 536 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 NR3C2P08235 984 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 SUPT20HL2P0C7V6 817 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 KIF5BP33176 963 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 MCM5P33992 734 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 HSD17B4P51659 736 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 TROAPQ12815 778 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 PPP1R13LQ8WUF5 828 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 NOC4LQ9BVI4 516 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 IL23AQ9NPF7 189 aa11.18□□□□□ -0.62
NPLOC4-216ENST00000574344 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms