RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 SHISA4Q96DD7 197 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 TOX2Q96NM4 488 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 ZMYM5Q9UJ78 669 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
KARSP3-201ENST00000571212 RGPD1P0DJD0 1748 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 TRPM3Q9HCF6 1732 aaPredicted RBP6.85□□□□□ -1.31
KARSP3-201ENST00000571212 CLSPNQ9HAW4 1339 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 ADGRB2O60241 1585 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 ALS2Q96Q42 1657 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 COL14A1Q05707 1796 aaKnown RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 TMEM82A0PJX8 343 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 MEIS1O00470 390 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 USP2O75604 605 aaPredicted RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 NME1P15531 152 aaKnown RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 ZNF605Q86T29 641 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 SPPL2CQ8IUH8 684 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 DAGLBQ8NCG7 672 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 PRAM1Q96QH2 718 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 NT5C1AQ9BXI3 368 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 BACH2Q9BYV9 841 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
KARSP3-201ENST00000571212 YBX2Q9Y2T7 364 aaKnown RBP6.84□□□□□ -1.31
KARSP3-201ENST00000571212 MYOCOSA0A1B0GUC4 107 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 CLEC3AO75596 197 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 SYPP08247 313 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 ZNF165P49910 485 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 DUSP4Q13115 394 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 RNF111Q6ZNA4 994 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
KARSP3-201ENST00000571212 SLC9A7Q96T83 725 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 SPON2Q9BUD6 331 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 MCOLN1Q9GZU1 580 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 PCDHGB7Q9Y5F8 929 aa6.83□□□□□ -1.32
KARSP3-201ENST00000571212 SAFB2Q14151 953 aaKnown RBP eCLIP6.82□□□□□ -1.32
KARSP3-201ENST00000571212 EIF3AQ14152 1382 aaKnown RBP6.82□□□□□ -1.32
KARSP3-201ENST00000571212 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 ZNF394Q53GI3 561 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 GPRASP1Q5JY77 1395 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 KIAA0825Q8IV33 1275 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 ZNF655Q8N720 491 aaPredicted RBP6.82□□□□□ -1.32
KARSP3-201ENST00000571212 ANKS4BQ8N8V4 417 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 PMFBP1Q8TBY8 1022 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 SLC6A18Q96N87 628 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 SLC6A17Q9H1V8 727 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 CWC22Q9HCG8 908 aaKnown RBP6.82□□□□□ -1.32
KARSP3-201ENST00000571212 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 POGKQ9P215 609 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 SMG5Q9UPR3 1016 aaKnown RBP6.82□□□□□ -1.32
KARSP3-201ENST00000571212 CRYBG1Q9Y4K1 1723 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 ADGRB1O14514 1584 aa6.82□□□□□ -1.32
KARSP3-201ENST00000571212 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 SSU72P8A0A1W2PR75 194 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 SIGLEC6O43699 453 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 PDE6BP35913 854 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 PCBP3P57721 371 aaKnown RBP6.81□□□□□ -1.32
KARSP3-201ENST00000571212 CHRNEQ04844 493 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 KCNA10Q16322 511 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 SGPP1Q9BX95 441 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 MKRN2Q9H000 416 aaKnown RBP6.81□□□□□ -1.32
KARSP3-201ENST00000571212 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 TNS1Q9HBL0 1735 aaKnown RBP6.81□□□□□ -1.32
KARSP3-201ENST00000571212 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 TULP4Q9NRJ4 1543 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 SPATA31A5Q5VU36 1347 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 SPATA31A7Q8IWB4 1347 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 MED14OSP0DP75 135 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 ZSCAN22P10073 491 aaPredicted RBP6.81□□□□□ -1.32
KARSP3-201ENST00000571212 ACRP10323 421 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 ZNF76P36508 570 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 CEP128Q6ZU80 1094 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 IRF2BP1Q8IU81 584 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 LINC00116Q8NCU8 138 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 ZSCAN18Q8TBC5 510 aaPredicted RBP6.81□□□□□ -1.32
KARSP3-201ENST00000571212 HHIPL1Q96JK4 782 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 FBXL21Q9UKT6 434 aa6.81□□□□□ -1.32
KARSP3-201ENST00000571212 ITSN1Q15811 1721 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 SDHBP21912 280 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 GLDCP23378 1020 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 RAD51AP2Q09MP3 1159 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 NLRX1Q86UT6 975 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 MAP6Q96JE9 813 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 CHST7Q9NS84 486 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 PODXL2Q9NZ53 605 aa6.8□□□□□ -1.32
KARSP3-201ENST00000571212 C9IYK1 514 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 CCNFP41002 786 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 CTSKP43235 329 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
KARSP3-201ENST00000571212 FANCCQ00597 558 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 SLC14A2Q15849 920 aa6.79□□□□□ -1.32
KARSP3-201ENST00000571212 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
KARSP3-201ENST00000571212 NGDNQ8NEJ9 315 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms