RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	PNMA2	Q9UL42	364 aa		12.85	□□□□□ -0.35
ABR-208	ENST00000570688	STK36	Q9NRP7	1315 aa		12.85	□□□□□ -0.35
ABR-208	ENST00000570688		M0R2N6	131 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	CTAGE5	O15320	804 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	ARIH2	O95376	493 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	EIF2AK2	P19525	551 aa	Known RBP	12.84	□□□□□ -0.35
ABR-208	ENST00000570688	EN2	P19622	333 aa	Predicted RBP	12.84	□□□□□ -0.35
ABR-208	ENST00000570688	NAPA	P54920	295 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	MRPS9	P82933	396 aa	Known RBP	12.84	□□□□□ -0.35
ABR-208	ENST00000570688	SSRP1	Q08945	709 aa	Known RBP	12.84	□□□□□ -0.35
ABR-208	ENST00000570688	CRYGN	Q8WXF5	182 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	BCAS3	Q9H6U6	928 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	PSTPIP2	Q9H939	334 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	RIC8A	Q9NPQ8	531 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	BIN2	Q9UBW5	565 aa	Predicted RBP	12.84	□□□□□ -0.35
ABR-208	ENST00000570688	KCNJ14	Q9UNX9	436 aa		12.84	□□□□□ -0.35
ABR-208	ENST00000570688	ESYT2	A0FGR8	921 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	SMCO2	A6NFE2	343 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-208	ENST00000570688	POLR2M	P0CAP2	368 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	SEMA3F	Q13275	785 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	ACVR2B	Q13705	512 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	PGM5	Q15124	567 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	EARS2	Q5JPH6	523 aa	Known RBP	12.83	□□□□□ -0.36
ABR-208	ENST00000570688	MFSD14C	Q5VZR4	134 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	PPP1R18	Q6NYC8	613 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	MCF2L2	Q86YR7	1114 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	TRMT44	Q8IYL2	757 aa	Known RBP	12.83	□□□□□ -0.36
ABR-208	ENST00000570688	MSL3	Q8N5Y2	521 aa	Known RBP	12.83	□□□□□ -0.36
ABR-208	ENST00000570688	DNER	Q8NFT8	737 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	OXER1	Q8TDS5	423 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	DEFB118	Q96PH6	123 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	RMDN3	Q96TC7	470 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	MAF1	Q9H063	256 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	CRISPLD2	Q9H0B8	497 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	RNF208	Q9H0X6	261 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	ORC3	Q9UBD5	711 aa	Predicted RBP	12.83	□□□□□ -0.36
ABR-208	ENST00000570688	TELO2	Q9Y4R8	837 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	ALPK3	Q96L96	1907 aa		12.83	□□□□□ -0.36
ABR-208	ENST00000570688	RBM47	A0AV96	593 aa	Known RBP	12.82	□□□□□ -0.36
ABR-208	ENST00000570688	MYADML2	A6NDP7	307 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	FAM205C	A6NFA0	338 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	CCDC85C	A6NKD9	419 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	hCG_1984214	I3L0E3	225 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	CPLX1	O14810	134 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	DEXI	O95424	95 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	GJB1	P08034	283 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	NR3C2	P08235	984 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	ADCYAP1R1	P41586	468 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	CCDC144B	Q3MJ40	725 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	UBE2Q1	Q7Z7E8	422 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	ZNF713	Q8N859	430 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-208	ENST00000570688	U2AF1L4	Q8WU68	220 aa	Known RBP	12.82	□□□□□ -0.36
ABR-208	ENST00000570688	COPS5	Q92905	334 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	PHF20	Q9BVI0	1012 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	HMX1	Q9NP08	348 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-208	ENST00000570688	SLC5A4	Q9NY91	659 aa		12.82	□□□□□ -0.36
ABR-208	ENST00000570688	ASB14	A6NK59	587 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	SEPT4	O43236	478 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	SMPD1	P17405	629 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	GJA8	P48165	433 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	ADCY7	P51828	1080 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	FOSB	P53539	338 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	CUL4A	Q13619	759 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	JAKMIP3	Q5VZ66	844 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	CCDC62	Q6P9F0	684 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	VSIG10L	Q86VR7	867 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	SAMD3	Q8N6K7	520 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	NSUN6	Q8TEA1	469 aa	Known RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	DIS3L	Q8TF46	1054 aa	Known RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	TNFRSF25	Q93038	417 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	ABHD16B	Q9H3Z7	469 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	MAP3K20	Q9NYL2	800 aa	Known RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	DDX20	Q9UHI6	824 aa	Known RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	PCDHA6	Q9UN73	950 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	GNE	Q9Y223	722 aa	Known RBP	12.81	□□□□□ -0.36
ABR-208	ENST00000570688	PCDHA8	Q9Y5H6	950 aa		12.81	□□□□□ -0.36
ABR-208	ENST00000570688	WNT7A	O00755	349 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ST18	O60284	1047 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ADAMTS4	O75173	837 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ITGB5	P18084	799 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	SP2	Q02086	613 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	DAGLB	Q8NCG7	672 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	CYP2W1	Q8TAV3	490 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	CUL5	Q93034	780 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ALG1	Q9BT22	464 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ANO3	Q9BYT9	981 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	SH3GLB2	Q9NR46	395 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	RBM27	Q9P2N5	1060 aa	Known RBP	12.8	□□□□□ -0.36
ABR-208	ENST00000570688	ADD3	Q9UEY8	706 aa	Known RBP	12.8	□□□□□ -0.36
ABR-208	ENST00000570688	NRBP1	Q9UHY1	535 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	OGDHL	Q9ULD0	1010 aa		12.8	□□□□□ -0.36
ABR-208	ENST00000570688	LOC102724159	A0A0B4J2E5	919 aa		12.79	□□□□□ -0.36
ABR-208	ENST00000570688	PGK1	P00558	417 aa		12.79	□□□□□ -0.36
ABR-208	ENST00000570688	MYCL	P12524	364 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-208	ENST00000570688	CNGA1	P29973	690 aa		12.79	□□□□□ -0.36

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