RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 CYTH3O43739 400 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 CDC45O75419 566 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 CABYRO75952 493 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 MYL3P08590 195 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 CDK7P50613 346 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 PSMC6P62333 389 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 NECTIN1Q15223 517 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 CTCFLQ8NI51 663 aaPredicted RBP14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 SCFD2Q8WU76 684 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 COPS5Q92905 334 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 RIOX1Q9H6W3 641 aa14.3□□□□□ -0.12
SEMA4B-220ENST00000561321 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 TLR3O15455 904 aaKnown RBP14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 DDAH1O94760 285 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 ARIH2O95376 493 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 NEFLP07196 543 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 RXRAP19793 462 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 HOXA13P31271 388 aaPredicted RBP14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 CPT1AP50416 773 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 HSD17B4P51659 736 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 ITGA7Q13683 1181 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 TTLL4Q14679 1199 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 SHHQ15465 462 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 C9orf50Q5SZB4 431 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 RNF20Q5VTR2 975 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 RAB11FIP4Q86YS3 637 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 FAM126BQ8IXS8 530 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
SEMA4B-220ENST00000561321 PNMA6FA0A0J9YX94 578 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 NKRFO15226 690 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 STXBP2Q15833 593 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 LY6KQ17RY6 165 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 TMEM87BQ96K49 555 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 MAF1Q9H063 256 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 TBX21Q9UL17 535 aa14.28□□□□□ -0.12
SEMA4B-220ENST00000561321 KIAA1217Q5T5P2 1943 aa14.27□□□□□ -0.12
SEMA4B-220ENST00000561321 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
SEMA4B-220ENST00000561321 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 PLEKHA8P1O95397 391 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 TIMP1P01033 207 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 NR3C2P08235 984 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 MYCLP12524 364 aaPredicted RBP14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 KIF5BP33176 963 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 EPHB4P54760 987 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 FPGSQ05932 587 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 TRAF1Q13077 416 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 Q7L0L9 218 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 CMTR1Q8N1G2 835 aaKnown RBP14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 TMTC2Q8N394 836 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 POLR3EQ9NVU0 708 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
SEMA4B-220ENST00000561321 CD4P01730 458 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 LIFRP42702 1097 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 DEFB123Q8N688 67 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 SLC43A3Q8NBI5 491 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 RRP36Q96EU6 259 aaKnown RBP14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 NEK1Q96PY6 1258 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 MRVI1Q9Y6F6 885 aa14.26□□□□□ -0.13
SEMA4B-220ENST00000561321 A6NJR5 290 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 SORBS3O60504 671 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 B4GALT4O60513 344 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 GH1P01241 217 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CALM1P0DP23 149 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CALM2P0DP24 149 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CALM3P0DP25 149 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CYP2C18P33260 490 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 GNAQP50148 359 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 GHRHRQ02643 423 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CCDC62Q6P9F0 684 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 MICU3Q86XE3 530 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 SRBD1Q8N5C6 995 aaKnown RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 IL31RAQ8NI17 732 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 RNPC3Q96LT9 517 aaKnown RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 LZTS2Q9BRK4 669 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 MAP3K20Q9NYL2 800 aaKnown RBP14.25□□□□□ -0.13
SEMA4B-220ENST00000561321 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms