RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 NECTIN1Q15223 517 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 SHHQ15465 462 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 CASC1Q6TDU7 716 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 OR6J1Q8NGC5 347 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 TAAR1Q96RJ0 339 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 RMDN3Q96TC7 470 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 LY9Q9HBG7 655 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 ANO2Q9NQ90 1003 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 PRC1O43663 620 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 DDAH1O94760 285 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 CFBP00751 764 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 CD4P01730 458 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 STXBP2Q15833 593 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 SLC35G1Q2M3R5 365 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 BRDTQ58F21 947 aaPredicted RBP20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 C9orf50Q5SZB4 431 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 CREB3L3Q68CJ9 461 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 TMTC2Q8N394 836 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 TMEM87BQ96K49 555 aa20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 LAMA2P24043 3122 aaKnown RBP20.89■□□□□ 0.93
TNFAIP2-206ENST00000560428 KIAA1217Q5T5P2 1943 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 GRIN2DO15399 1336 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 CYTH3O43739 400 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 TXNP10599 105 aaKnown RBP20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 ARHGEF16Q5VV41 709 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 SKAP1Q86WV1 359 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 PIGSQ96S52 555 aa20.88■□□□□ 0.93
TNFAIP2-206ENST00000560428 A6NJR5 290 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 KPNA6O60684 536 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 KIF5BP33176 963 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 CCDC62Q6P9F0 684 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 ZNF654Q8IZM8 581 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 DEFB123Q8N688 67 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 PXMP2Q9NR77 195 aa20.87■□□□□ 0.93
TNFAIP2-206ENST00000560428 SH2B2O14492 632 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 ARIH2O95376 493 aa20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 EIF2AK2P19525 551 aaKnown RBP20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 SMARCA1P28370 1054 aa20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 LIFRP42702 1097 aa20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 RNF20Q5VTR2 975 aa20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 FAM109BQ6ICB4 259 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 MTG1Q9BT17 334 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 SPZ1Q9BXG8 430 aa20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 GPHNQ9NQX3 736 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP2-206ENST00000560428 CDC45O75419 566 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 NR3C2P08235 984 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 EPHB4P54760 987 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 PSMC6P62333 389 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 TMEM199Q8N511 208 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 COPS5Q92905 334 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 LZTS2Q9BRK4 669 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 BAZ2BQ9UIF8 2168 aaKnown RBP20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 SCN10AQ9Y5Y9 1956 aa20.85■□□□□ 0.93
TNFAIP2-206ENST00000560428 CCDC69A6NI79 296 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 MYL3P08590 195 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 CALM1P0DP23 149 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 CALM2P0DP24 149 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 CALM3P0DP25 149 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 GNAQP50148 359 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 PPIGQ13427 754 aaKnown RBP eCLIP20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 NFXL1Q6ZNB6 911 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 SEPT14Q6ZU15 432 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 RNPC3Q96LT9 517 aaKnown RBP20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 PDCD2LQ9BRP1 358 aa20.84■□□□□ 0.93
TNFAIP2-206ENST00000560428 GCOM1H8Y6P7 765 aaPredicted RBP20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 B4GALT4O60513 344 aa20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 GH1P01241 217 aa20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 POLR2MP0CAP2 368 aa20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 MYL10Q9BUA6 226 aa20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 PPP1R12CQ9BZL4 782 aa20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.93
TNFAIP2-206ENST00000560428 SUPT20HL2P0C7V6 817 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 HOXA13P31271 388 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 ARHGAP1Q07960 439 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 Q7L0L9 218 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 EMID1Q96A84 441 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 TRPV6Q9H1D0 765 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 HIPK3Q9H422 1215 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
TNFAIP2-206ENST00000560428 CSF2RAP15509 400 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 PTPN11Q06124 597 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 COL9A3Q14050 684 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 PGM5Q15124 567 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 LY6KQ17RY6 165 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 TSGA10IPQ3SY00 556 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 NFRKBQ6P4R8 1299 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 SGMS1Q86VZ5 419 aa20.81■□□□□ 0.92
TNFAIP2-206ENST00000560428 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms