RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DPEP1P16444 411 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 ETF1P62495 437 aaKnown RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 STIM1Q13586 685 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 LRRC41Q15345 812 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 KIAA1755Q5JYT7 1200 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 CC2D2BQ6DHV5 1058 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 SV2BQ7L1I2 683 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 ACER1Q8TDN7 264 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 LARP4BQ92615 738 aaKnown RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 MTMR8Q96EF0 704 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 WDR24Q96S15 920 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 DUSP9Q99956 384 aaKnown RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 PDCL3Q9H2J4 239 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 GREB1LQ9C091 1923 aaPredicted RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 KLK7P49862 253 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM1-210ENST00000558264 KRT79Q5XKE5 535 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 ANKRD20A12PQ8NF67 263 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 UBE2Q2Q8WVN8 375 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
TPM1-210ENST00000558264 ANO3Q9BYT9 981 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 TBC1D7Q9P0N9 293 aa11.83□□□□□ -0.52
TPM1-210ENST00000558264 COL4A5P29400 1685 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 SHTN1A0MZ66 631 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 H7C1D1 291 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
TPM1-210ENST00000558264 GNG11P61952 73 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 FKBP1AP62942 108 aaKnown RBP11.82□□□□□ -0.52
TPM1-210ENST00000558264 ELF2Q15723 593 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 ACRBPQ8NEB7 543 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 MKL1Q969V6 931 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 C7orf25Q9BPX7 421 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 MRIQ9BWK5 157 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 TMEM39BQ9GZU3 492 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 PCDHA12Q9UN75 941 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 E9PMD0 336 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 MEIS2O14770 477 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 PRR16Q569H4 304 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 PDCL2Q8N4E4 241 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 P2RX5Q93086 422 aa11.82□□□□□ -0.52
TPM1-210ENST00000558264 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
TPM1-210ENST00000558264 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 POTECB2RU33 542 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 ABL1P00519 1130 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 BMP3P12645 472 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 ERVK-24P63145 666 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 SPAG1Q07617 926 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 DLGAP5Q15398 846 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 PPP4R3AQ6IN85 833 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 RSBN1LQ6PCB5 846 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 ANKRD7Q92527 254 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 RAD54LQ92698 747 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 DDX12PQ92771 950 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 PANX2Q96RD6 677 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 SEMA6BQ9H3T3 888 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 MAGEC2Q9UBF1 373 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 KRT9P35527 623 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 AMPD3Q01432 767 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 SYDE2Q5VT97 1194 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 CCDC47Q96A33 483 aaKnown RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
TPM1-210ENST00000558264 ZNF70Q9UC06 446 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
TPM1-210ENST00000558264 CCP110O43303 1012 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 ENTPD3O75355 529 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 SLU7O95391 586 aaKnown RBP11.8□□□□□ -0.52
TPM1-210ENST00000558264 MYL1P05976 194 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 UBXN2AP68543 259 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 SUPT20HQ8NEM7 779 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 CHP1Q99653 195 aa11.8□□□□□ -0.52
TPM1-210ENST00000558264 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms