RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 ZEB2O60315 1214 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 PDIA3P30101 505 aaKnown RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 CCND2P30279 289 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 HSD17B4P51659 736 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 ADCY7P51828 1080 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 NEK4P51957 841 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 TOB2Q14106 344 aaPredicted RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 TTLL4Q14679 1199 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 LRRC41Q15345 812 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 TLK2Q86UE8 772 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 SAMD3Q8N6K7 520 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 CCDC12Q8WUD4 166 aaPredicted RBP10.33□□□□□ -0.76
SPG11-207ENST00000558138 PHKBQ93100 1093 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 FERMT2Q96AC1 680 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 IWS1Q96ST2 819 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 C22orf23Q9BZE7 217 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 PXMP2Q9NR77 195 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 ASTN1O14525 1302 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
SPG11-207ENST00000558138 hCG_1984214I3L0E3 225 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 DYNC1LI2O43237 492 aaPredicted RBP10.32□□□□□ -0.76
SPG11-207ENST00000558138 CDKL5O76039 1030 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 TXNP10599 105 aaKnown RBP10.32□□□□□ -0.76
SPG11-207ENST00000558138 AK2P54819 239 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 UBE2SQ16763 222 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 GNASQ5JWF2 1037 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 WWC2Q6AWC2 1192 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 IQSEC1Q6DN90 963 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 C7orf61Q8IZ16 206 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 ZNF713Q8N859 430 aaPredicted RBP10.32□□□□□ -0.76
SPG11-207ENST00000558138 OR6J1Q8NGC5 347 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 SCFD2Q8WU76 684 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 AGXT2Q9BYV1 514 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 COL20A1Q9P218 1284 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 NR2E3Q9Y5X4 410 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 MRVI1Q9Y6F6 885 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 LCTP09848 1927 aa10.32□□□□□ -0.76
SPG11-207ENST00000558138 LRRC37A2A6NM11 1700 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 SMCO2A6NFE2 343 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 OPLAHO14841 1288 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 IGHA2P01877 340 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 NR3C2P08235 984 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 SCG2P13521 617 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 SMPD1P17405 629 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 CHMP4BP1P59074 171 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 BEX3Q00994 111 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 PGM5Q15124 567 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 PFKFB3Q16875 520 aaPredicted RBP10.31□□□□□ -0.76
SPG11-207ENST00000558138 GNPTABQ3T906 1256 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 PCSK9Q8NBP7 692 aaKnown RBP10.31□□□□□ -0.76
SPG11-207ENST00000558138 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
SPG11-207ENST00000558138 PDCD2LQ9BRP1 358 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 RNF26Q9BY78 433 aaPredicted RBP10.31□□□□□ -0.76
SPG11-207ENST00000558138 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 C6orf50Q9HD87 102 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 STARD7Q9NQZ5 370 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 ATP11BQ9Y2G3 1177 aa10.31□□□□□ -0.76
SPG11-207ENST00000558138 NKRFO15226 690 aaKnown RBP eCLIP10.3□□□□□ -0.76
SPG11-207ENST00000558138 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
SPG11-207ENST00000558138 SORBS3O60504 671 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
SPG11-207ENST00000558138 MYL3P08590 195 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 EDNRBP24530 442 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 CPT1AP50416 773 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 KCNA10Q16322 511 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 FSCN1Q16658 493 aaKnown RBP10.3□□□□□ -0.76
SPG11-207ENST00000558138 DUSP28Q4G0W2 176 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 TAPT1Q6NXT6 567 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 MORC4Q8TE76 937 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
SPG11-207ENST00000558138 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 KATNBL1Q9H079 304 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
SPG11-207ENST00000558138 BARHL2Q9NY43 387 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 RTEL1Q9NZ71 1219 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 PRKAG2Q9UGJ0 569 aa10.3□□□□□ -0.76
SPG11-207ENST00000558138 NID2Q14112 1375 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
SPG11-207ENST00000558138 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 MYADML2A6NDP7 307 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 MOXD2PA6NHM9 499 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 STXBP3O00186 592 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 ADCY6O43306 1168 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 ST18O60284 1047 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 DEXIO95424 95 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 GH1P01241 217 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 IFNAR1P17181 557 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 XBP1P17861 261 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 GNA11P29992 359 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms