RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FBLN5Q9UBX5 448 aa4.68□□□□□ -1.66
SCFD1-213ENST00000554776 PFDN2Q9UHV9 154 aa4.68□□□□□ -1.66
SCFD1-213ENST00000554776 RWDD3Q9Y3V2 267 aa4.68□□□□□ -1.66
SCFD1-213ENST00000554776 TCAF2A6NFQ2 919 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 ARNTLO00327 626 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 FGFR1P11362 822 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 ECI1P42126 302 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 IFRD2Q12894 506 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 HSP90AA2PQ14568 343 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 NFE2L2Q16236 605 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 INF2Q27J81 1249 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 PRSS53Q2L4Q9 553 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 SLC35F1Q5T1Q4 408 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 YOD1Q5VVQ6 348 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 TMEM132EQ6IEE7 984 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 DENND5AQ6IQ26 1287 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 TMC6Q7Z403 805 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 ANKLE2Q86XL3 938 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 CCDC103Q8IW40 242 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 JMYQ8N9B5 988 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 TMEM145Q8NBT3 493 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 DPF3Q92784 378 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 DNAJC7Q99615 494 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 AARSD1Q9BTE6 412 aaKnown RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 SGPP1Q9BX95 441 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 SIRT5Q9NXA8 310 aa4.67□□□□□ -1.66
SCFD1-213ENST00000554776 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.67□□□□□ -1.665e-7■■■□□ 17.9
SCFD1-213ENST00000554776 TMEFF2Q9UIK5 374 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 SMG5Q9UPR3 1016 aaKnown RBP4.67□□□□□ -1.66
SCFD1-213ENST00000554776 N4BP3O15049 544 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 MEFVO15553 781 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-213ENST00000554776 DLX3O60479 287 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 KCNJ6P48051 423 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 CDR1P51861 262 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 EPHB3P54753 998 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 MAP4K2Q12851 820 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 KCNAB2Q13303 367 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 KCNA10Q16322 511 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 ZC3H14Q6PJT7 736 aaKnown RBP4.66□□□□□ -1.66
SCFD1-213ENST00000554776 CABP7Q86V35 215 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 NETO2Q8NC67 525 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 DIO2Q92813 273 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 OSBP2Q969R2 916 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 TOX2Q96NM4 488 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 IER2Q9BTL4 223 aa4.66□□□□□ -1.66
SCFD1-213ENST00000554776 TRAV20A0A0B4J274 112 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 ZC3H12DA2A288 527 aaKnown RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 NPIPB6E9PJ23 425 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 F8W031 263 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 FAM153BP0C7A2 387 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 PABPC1P11940 636 aaKnown RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 FBLN1P23142 703 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 CFPP27918 469 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 LTBRP36941 435 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 LINC00310P59036 64 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 LONRF2Q1L5Z9 754 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 FOXB2Q5VYV0 432 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 WWC2Q6AWC2 1192 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 LDHDQ86WU2 507 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 C1QL4Q86Z23 238 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 PPIL6Q8IXY8 311 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 Q8N1Y9 231 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 ZBTB38Q8NAP3 1195 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 MZB1Q8WU39 189 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 KCTD13Q8WZ19 329 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 PCDHA5Q9Y5H7 936 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 TIMM13Q9Y5L4 95 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-213ENST00000554776 NPFFR2Q9Y5X5 522 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 HCFC2Q9Y5Z7 792 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 KDM2BQ8NHM5 1336 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 IRS2Q9Y4H2 1338 aa4.65□□□□□ -1.67
SCFD1-213ENST00000554776 BTBD11A6QL63 1104 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 PRODHO43272 600 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 FUCA1P04066 466 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 GTF2A2P52657 109 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
SCFD1-213ENST00000554776 PRR5P85299 388 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 ZNF200P98182 395 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-213ENST00000554776 NTRK3Q16288 839 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 C2orf27AQ580R0 203 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 IGDCC3Q8IVU1 814 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 LRRC56Q8IYG6 542 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-213ENST00000554776 LILRB2Q8N423 598 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 RCBTB1Q8NDN9 531 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 USP33Q8TEY7 942 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 TSPAN17Q96FV3 270 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 EXOC2Q96KP1 924 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 SIGLEC10Q96LC7 697 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 MARCH2Q9P0N8 246 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 NUDT5Q9UKK9 219 aa4.64□□□□□ -1.67
SCFD1-213ENST00000554776 C22orf46C9J442 243 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 MYO1BO43795 1136 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 NTRK1P04629 796 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 LCP1P13796 627 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 FZD5Q13467 585 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 SSPNQ14714 243 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 NSMFQ6X4W1 530 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms