RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TMEM60Q9H2L4 133 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 MROH8Q9H579 483 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 EFCC1Q9HA90 598 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 C6orf50Q9HD87 102 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 FBXO2Q9UK22 296 aaPredicted RBP7.74□□□□□ -1.17
LINC00517-202ENST00000554257 CNPY2Q9Y2B0 182 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 PFASO15067 1338 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 VPS37CA5D8V6 355 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 RAD21O60216 631 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 HOXC6P09630 235 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 GNA11P29992 359 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 COPB2P35606 906 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 NLRP5P59047 1200 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 IRX3P78415 501 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ATP2C1P98194 919 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 GRIN1Q05586 938 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ORC2Q13416 577 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 PCNX4Q63HM2 1172 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ATL3Q6DD88 541 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 GPR142Q7Z601 462 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ZNF467Q7Z7K2 595 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 GPRC5AQ8NFJ5 357 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 GLT8D2Q9H1C3 349 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 LMBRD1Q9NUN5 540 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 FLRT1Q9NZU1 646 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 DDX49Q9Y6V7 483 aaKnown RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 RBM47A0AV96 593 aaKnown RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 DHX15O43143 795 aaKnown RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ALAS1P13196 640 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ITGB5P18084 799 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 PTPREP23469 700 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 CNTN2Q02246 1040 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 PIK3AP1Q6ZUJ8 805 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 KRT25Q7Z3Z0 450 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 TBCKQ8TEA7 893 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 ARHGAP39Q9C0H5 1083 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 SCN10AQ9Y5Y9 1956 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 LOC102724159A0A0B4J2E5 919 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 USP11P51784 963 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 BAATQ14032 418 aaPredicted RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 PWP2Q15269 919 aaKnown RBP7.73□□□□□ -1.17
LINC00517-202ENST00000554257 INF2Q27J81 1249 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 NIPA1Q7RTP0 329 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 DNERQ8NFT8 737 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 BICD2Q8TD16 824 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 CPA4Q9UI42 421 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 KIF3AQ9Y496 699 aa7.73□□□□□ -1.17
LINC00517-202ENST00000554257 TDP2O95551 362 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 ALDH5A1P51649 535 aaPredicted RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 SLC39A14Q15043 492 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 JAKMIP3Q5VZ66 844 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 CPXCR1Q8N123 301 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 CYP2W1Q8TAV3 490 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 LEO1Q8WVC0 666 aaPredicted RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 PDCD2LQ9BRP1 358 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 GCOM1H8Y6P7 765 aaPredicted RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 MEIS1O00470 390 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 YEATS4O95619 227 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 POLR2MP0CAP2 368 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 ARHGAP4P98171 946 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 AKAP17AQ02040 695 aaKnown RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 RNF207Q6ZRF8 634 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 VSIG10LQ86VR7 867 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 DIS3Q9Y2L1 958 aaKnown RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 ADCY6O43306 1168 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 PPP6R2O75170 966 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 ICAM3P32942 547 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 MRPL12P52815 198 aaKnown RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 TRAF1Q13077 416 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 NONOQ15233 471 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 RILPL1Q5EBL4 403 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 ANO1Q5XXA6 986 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 INPP4AQ96PE3 977 aaPredicted RBP7.72□□□□□ -1.17
LINC00517-202ENST00000554257 FBXO40Q9UH90 709 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 HPSEQ9Y251 543 aa7.72□□□□□ -1.17
LINC00517-202ENST00000554257 FOSP01100 380 aaPredicted RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 XBP1P17861 261 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 PRPHP41219 470 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 LACTBP83111 547 aaPredicted RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 IKQ13123 557 aaPredicted RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 SF3A1Q15459 793 aaKnown RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 TAF1CQ15572 869 aaPredicted RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 NEK8Q86SG6 692 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 IGSF22Q8N9C0 903 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 SLC5A5Q92911 643 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 MMTAG2Q9BU76 263 aaKnown RBP7.71□□□□□ -1.17
LINC00517-202ENST00000554257 HOMER2Q9NSB8 354 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 WBP1LQ9NX94 342 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 TELO2Q9Y4R8 837 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 TANC1Q9C0D5 1861 aa7.71□□□□□ -1.17
LINC00517-202ENST00000554257 A0A087X0B3 334 aa7.71□□□□□ -1.18
LINC00517-202ENST00000554257 SLC15A5A6NIM6 579 aa7.71□□□□□ -1.18
LINC00517-202ENST00000554257 H3BQV1 296 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms