RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PTPRSQ13332 1948 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 UNC80Q8N2C7 3258 aa7.71□□□□□ -1.17
SLIRP-203ENST00000554074 CHD9Q3L8U1 2897 aa7.71□□□□□ -1.17
SLIRP-203ENST00000554074 A6NJR5 290 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 B4GALT4O60513 344 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 NEFLP07196 543 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 CSF2RAP15509 400 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 DNAJB2P25686 324 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 TRDNQ13061 729 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 TRAF1Q13077 416 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 TTLL4Q14679 1199 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 QRICH1Q2TAL8 776 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 USH1GQ495M9 461 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 TMEM63BQ5T3F8 832 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 IFIT1BQ5T764 474 aaKnown RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 NFRKBQ6P4R8 1299 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 CCDC62Q6P9F0 684 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 C16orf59Q7L2K0 433 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 FBXO11Q86XK2 927 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 OR6J1Q8NGC5 347 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 SYTL5Q8TDW5 730 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 NSUN6Q8TEA1 469 aaKnown RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 HERVK_113Q902F9 699 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 MTG1Q9BT17 334 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 PPP1R12CQ9BZL4 782 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 IL25Q9H293 177 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 ALDH8A1Q9H2A2 487 aaPredicted RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 MTIF3Q9H2K0 278 aaKnown RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 JMJD4Q9H9V9 463 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 IL23AQ9NPF7 189 aa7.71□□□□□ -1.18
SLIRP-203ENST00000554074 MRPL11Q9Y3B7 192 aaKnown RBP7.71□□□□□ -1.18
SLIRP-203ENST00000554074 NCOR1O75376 2440 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 EYSQ5T1H1 3165 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-203ENST00000554074 KLRF2D3W0D1 207 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 PFKMP08237 780 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 CYP21A2P08686 494 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 TXNP10599 105 aaKnown RBP7.7□□□□□ -1.18
SLIRP-203ENST00000554074 PTGS1P23219 599 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 CHMLP26374 656 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 CYP2C18P33260 490 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 HSD17B4P51659 736 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 RPUSD2Q8IZ73 545 aaKnown RBP7.7□□□□□ -1.18
SLIRP-203ENST00000554074 FAM161BQ96MY7 647 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 AMNQ9BXJ7 453 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 TRPV6Q9H1D0 765 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 WNT8AQ9H1J5 351 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 CPVLQ9H3G5 476 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 GPHNQ9NQX3 736 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-203ENST00000554074 COL20A1Q9P218 1284 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 CHD7Q9P2D1 2997 aa7.7□□□□□ -1.18
SLIRP-203ENST00000554074 MICAL3Q7RTP6 2002 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 TRANK1O15050 2925 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 PITPNM1O00562 1244 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 ZBTB5O15062 677 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 SGSM2O43147 1006 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 DHX16O60231 1041 aaKnown RBP7.69□□□□□ -1.18
SLIRP-203ENST00000554074 ABCB7O75027 752 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 EIF3JO75822 258 aaKnown RBP7.69□□□□□ -1.18
SLIRP-203ENST00000554074 GH1P01241 217 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 FGBP02675 491 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 MYL3P08590 195 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 RFC2P35250 354 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 PSMC6P62333 389 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 GRM4Q14833 912 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 SART3Q15020 963 aaKnown RBP7.69□□□□□ -1.18
SLIRP-203ENST00000554074 RAB30Q15771 203 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 STXBP2Q15833 593 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 ZNF365Q70YC5 407 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 CYB5R4Q7L1T6 521 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 SESTD1Q86VW0 696 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
SLIRP-203ENST00000554074 STAG2Q8N3U4 1231 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 NCOA7Q8NI08 942 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 TBC1D5Q92609 795 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 MAP4K1Q92918 833 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 EMID1Q96A84 441 aaPredicted RBP7.69□□□□□ -1.18
SLIRP-203ENST00000554074 TIFAQ96CG3 184 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 TAAR1Q96RJ0 339 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 RMDN3Q96TC7 470 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 MTA3Q9BTC8 594 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 PBX4Q9BYU1 374 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 ZNF576Q9H609 170 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 RIOX1Q9H6W3 641 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 PXMP2Q9NR77 195 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 MAD2L2Q9UI95 211 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 UMODL1Q5DID0 1318 aa7.69□□□□□ -1.18
SLIRP-203ENST00000554074 ERICH2A1L162 156 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 OPLAHO14841 1288 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 IFIT3O14879 490 aaKnown RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 PPP1R11O60927 126 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 ARIH2O95376 493 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 NR3C2P08235 984 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 MMP3P08254 477 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 ACRP10323 421 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 FOSL2P15408 326 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 PTH1RQ03431 593 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 ARHGAP1Q07960 439 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms