RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PFKMP08237 780 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 POLR2MP0CAP2 368 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CALM1P0DP23 149 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CALM2P0DP24 149 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CALM3P0DP25 149 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 ACTN1P12814 892 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CSF2RAP15509 400 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 ITGB8P26012 769 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 MCM5P33992 734 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 IRX6P78412 446 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-205ENST00000553904 PURAQ00577 322 aaKnown RBP7.56□□□□□ -1.2
FOXN3-205ENST00000553904 PTH1RQ03431 593 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 BFSP2Q13515 415 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 DGKDQ16760 1214 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 FAM47CQ5HY64 1035 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 NFRKBQ6P4R8 1299 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 SEPT14Q6ZU15 432 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 Q7L0L9 218 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CYB5R4Q7L1T6 521 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 RASGRP2Q7LDG7 609 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 STAG2Q8N3U4 1231 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CTCFLQ8NI51 663 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-205ENST00000553904 CUL5Q93034 780 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 TMEM87BQ96K49 555 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 KATNAL1Q9BW62 490 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 RIOX1Q9H6W3 641 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 IL23AQ9NPF7 189 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 MAD2L2Q9UI95 211 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 MSRAQ9UJ68 235 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 BRCA2P51587 3418 aa7.56□□□□□ -1.2
FOXN3-205ENST00000553904 ASTN1O14525 1302 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 ZNFX1Q9P2E3 1918 aaKnown RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 MYH4Q9Y623 1939 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 B4GALT4O60513 344 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 PPFIA4O75335 1185 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 RFC2P35250 354 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 HSD17B4P51659 736 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 IRX5P78411 483 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 GRM4Q14833 912 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 RAB30Q15771 203 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 GNPTABQ3T906 1256 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 CCDC62Q6P9F0 684 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 STOX1Q6ZVD7 989 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 ZNF365Q70YC5 407 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 CENPQQ7L2Z9 268 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 DHX37Q8IY37 1157 aaKnown RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 IGDCC4Q8TDY8 1250 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 MTMR8Q96EF0 704 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 RRP36Q96EU6 259 aaKnown RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 FAM161BQ96MY7 647 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.55□□□□□ -1.29e-6■■■■■ 27.7
FOXN3-205ENST00000553904 ALDH8A1Q9H2A2 487 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 SEC63Q9UGP8 760 aaKnown RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 MRVI1Q9Y6F6 885 aa7.55□□□□□ -1.2
FOXN3-205ENST00000553904 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-205ENST00000553904 KIF28PB7ZC32 967 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 DDAH1O94760 285 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 MYCLP12524 364 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-205ENST00000553904 CCND2P30279 289 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 CYP2C18P33260 490 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 PSMC6P62333 389 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 GHRHRQ02643 423 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 TROAPQ12815 778 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 LY6KQ17RY6 165 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 BMP2KLQ5H9B9 411 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 XRRA1Q6P2D8 792 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 VSIG10LQ86VR7 867 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 SMARCC2Q8TAQ2 1214 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 EMID1Q96A84 441 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-205ENST00000553904 PIGSQ96S52 555 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 CDX2Q99626 313 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-205ENST00000553904 TRPV6Q9H1D0 765 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 MLXIPQ9HAP2 919 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 PXMP2Q9NR77 195 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 DDX41Q9UJV9 622 aaKnown RBP7.54□□□□□ -1.2
FOXN3-205ENST00000553904 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 SLC4A7Q9Y6M7 1214 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 PARP14Q460N5 1801 aa7.54□□□□□ -1.2
FOXN3-205ENST00000553904 GRIN2DO15399 1336 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 DLL1O00548 723 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PITPNM1O00562 1244 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 MAFGO15525 162 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 PRC1O43663 620 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 HMGB1P09429 215 aaKnown RBP7.53□□□□□ -1.2
FOXN3-205ENST00000553904 ACRP10323 421 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 GNAT1P11488 350 aa7.53□□□□□ -1.2
FOXN3-205ENST00000553904 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms