RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 REPS2Q8NFH8 660 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 CLEC4DQ8WXI8 215 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 TBC1D5Q92609 795 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 MBOAT7Q96N66 472 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 TRERF1Q96PN7 1200 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 TEX13BQ9BXU2 312 aa15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 DDX25Q9UHL0 483 aaKnown RBP15.5■□□□□ 0.07
CALCOCO1-214ENST00000549613 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 EDIL3O43854 480 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 TDP2O95551 362 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 ZNF76P36508 570 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 STAT3P40763 770 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 UBA7P41226 1012 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 IL17AQ16552 155 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 Q4G0T1 1027 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 SNRNP48Q6IEG0 339 aaKnown RBP15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 KRBA2Q6ZNG9 492 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 CNNM3Q8NE01 707 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 CCSER1Q9C0I3 900 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 CCDC39Q9UFE4 941 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 AGTPBP1Q9UPW5 1226 aa15.49■□□□□ 0.07
CALCOCO1-214ENST00000549613 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 TBX3O15119 743 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 POLR2DO15514 142 aaKnown RBP15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 TAL1P17542 331 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 TXKP42681 527 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 PDIA5Q14554 519 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 SLFN12Q8IYM2 578 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 EPSTI1Q96J88 318 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 RNF146Q9NTX7 359 aa15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 ZNF214Q9UL59 606 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO1-214ENST00000549613 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 CETPP11597 493 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 MRE11P49959 708 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 GTF2A2P52657 109 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 ZRSR1Q15695 479 aaKnown RBP15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 LBX2Q6XYB7 198 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 RNF207Q6ZRF8 634 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 USP49Q70CQ1 688 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 CKAP2LQ8IYA6 745 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 CHST13Q8NET6 341 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 GTF3C2Q8WUA4 911 aaPredicted RBP15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 WNK4Q96J92 1243 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 FAM20AQ96MK3 541 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 P2RX7Q99572 595 aaKnown RBP15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 FBXO40Q9UH90 709 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 MYH7BA7E2Y1 1941 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 PTPRFP10586 1907 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 RLFQ13129 1914 aa15.47■□□□□ 0.07
CALCOCO1-214ENST00000549613 SMCHD1A6NHR9 2005 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 NFIBO00712 420 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 SLC26A4O43511 780 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 SLC37A4O43826 429 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 CAVIN2O95810 425 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 COPB2P35606 906 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 TECP42680 631 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 FMR1Q06787 632 aaKnown RBP eCLIP15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 PLS1Q14651 629 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 MUM1L1Q5H9M0 696 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 SYTL5Q8TDW5 730 aaPredicted RBP15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 FUCA2Q9BTY2 467 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 PANK2Q9BZ23 570 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 ASCC2Q9H1I8 757 aaPredicted RBP15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 ACAD9Q9H845 621 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 HOMER2Q9NSB8 354 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 LRWD1Q9UFC0 647 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 SERTAD1Q9UHV2 236 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 PCDHA12Q9UN75 941 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 LOC285556D6RIA3 1793 aa15.46■□□□□ 0.07
CALCOCO1-214ENST00000549613 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 RPS6P62753 249 aaKnown RBP15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 PRR16Q569H4 304 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 XRRA1Q6P2D8 792 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 NSMFQ6X4W1 530 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 CABP7Q86V35 215 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 PDILTQ8N807 584 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 IGSF22Q8N9C0 903 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 RASSF8Q8NHQ8 419 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 DHX58Q96C10 678 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 KCNMB3Q9NPA1 279 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 KIAA1468Q9P260 1216 aa15.45■□□□□ 0.06
CALCOCO1-214ENST00000549613 SLC45A1Q9Y2W3 748 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms